Domain ID e3i3bC5

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: Glyco_hydro_2_C
UID: 000390653
Type: Automatic domain
Parent: e1jz8A5
Range: C:334-625
Ligands: 149 DMS MG NA
PDB: 3i3b
PDB Description: Beta-galactosidase
UniProt: P00722
Hsap BLAST neighbor: P08236
Species:

Structure of domain e3i3bC5

Domains in the same chain:

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e3i3bC1 C:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e3i3bC2 C:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3i3bC5 C:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e3i3bC3 C:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3i3bC4 C:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich

Domains in the same PDB:

e3i3bA1 A:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e3i3bA2 A:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3i3bA5 A:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e3i3bA3 A:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3i3bA4 A:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich
e3i3bB1 B:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e3i3bB2 B:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3i3bB5 B:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e3i3bB3 B:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3i3bB4 B:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich
e3i3bC1 C:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e3i3bC2 C:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3i3bC5 C:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e3i3bC3 C:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3i3bC4 C:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich
e3i3bD1 D:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e3i3bD2 D:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3i3bD5 D:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e3i3bD3 D:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3i3bD4 D:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich

Structural contacts of domain e3i3bC5 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3i3bB1 C:x,y,z->B:X,Y,Z Galactose-binding domain-like Interaction Interface Pymol
e3i3bB2 C:x,y,z->B:X,Y,Z Immunoglobulin-related Interaction Interface Pymol
e3i3bB5 C:x,y,z->B:X,Y,Z TIM barrels Interaction Interface Pymol
e3i3bD5 C:X,Y,Z->D:x,y,z TIM barrels Interaction Interface Pymol
e3i3bB5 C:X-1/2,-Y+1/2,-Z->B:x,y,z TIM barrels Interaction Interface Pymol
e3i3bB1 C:X-1/2,-Y+1/2,-Z->B:x,y,z Galactose-binding domain-like Interaction Interface Pymol