Domain ID e3i3eA5

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: Glyco_hydro_2_C
UID: 000390683
Type: Automatic domain
Parent: e1jz8A5
Range: A:334-625
Ligands: DMS MG NA
PDB: 3i3e
PDB Description: Beta-galactosidase
UniProt: P00722
Hsap BLAST neighbor: P08236
Species:

Structure of domain e3i3eA5

Domains in the same chain:

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e3i3eA1 A:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e3i3eA2 A:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3i3eA5 A:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e3i3eA3 A:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3i3eA4 A:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich

Domains in the same PDB:

e3i3eA1 A:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e3i3eA2 A:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3i3eA5 A:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e3i3eA3 A:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3i3eA4 A:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich
e3i3eB1 B:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e3i3eB2 B:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3i3eB5 B:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e3i3eB3 B:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3i3eB4 B:731-1022 Glycosyl hydrolase domain-like supersandwich supersandwich
e3i3eC1 C:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e3i3eC2 C:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3i3eC5 C:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e3i3eC3 C:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3i3eC4 C:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich
e3i3eD1 D:13-219 jelly-roll Galactose-binding domain-like Galactose-binding domain-like
e3i3eD2 D:220-333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3i3eD5 D:334-625 TIM beta/alpha-barrel TIM barrels TIM barrels
e3i3eD3 D:626-730 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3i3eD4 D:731-1023 Glycosyl hydrolase domain-like supersandwich supersandwich

Structural contacts of domain e3i3eA5 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3i3eD2 A:X,Y,Z->D:x,y,z Immunoglobulin-related Interaction Interface Pymol
e3i3eD5 A:X,Y,Z->D:x,y,z TIM barrels Interaction Interface Pymol
e3i3eD1 A:X,Y,Z->D:x,y,z Galactose-binding domain-like Interaction Interface Pymol
e3i3eB5 A:X,Y,Z->B:x,y,z TIM barrels Interaction Interface Pymol