ECOD: domain e3i6vA1

Domain ID e3i6vA1

A: a/b three-layered sandwiches
X: Periplasmic binding protein-like II
H: Periplasmic binding protein-like II
T: Periplasmic binding protein-like II
F: SBP_bac_3

UID:	001520963
Type:	Automatic domain
Parent:	e1wdnA2
Range:	A:52-136,A:225-269
Ligands:	GOL LYS NA
PDB:	3i6v
PDB Description:	periplasmic His/Glu/Gln/Arg/opine family-binding protein
UniProt:	Q5LTV6
Species:	Ruegeria pomeroyi

Domains in the same chain:

Download Pymol

e3i6vA1	A:52-136,A:225-269	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3i6vA2	A:137-224	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Domains in the same PDB:

e3i6vA1	A:52-136,A:225-269	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II
e3i6vA2	A:137-224	Periplasmic binding protein-like II	Periplasmic binding protein-like II	Periplasmic binding protein-like II

Structural contacts of domain e3i6vA1 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3i6vA2	A:x,y,z->A:-Y-1,-X-1,-Z-1/4	Periplasmic binding protein-like II	Interaction Interface Pymol
e3i6vA2	A:-Y-1,-X-1,-Z-1/4->A:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e3i6vA2	A:x,y,z->A:-X-2,Y,-Z	Periplasmic binding protein-like II	Interaction Interface Pymol
e3i6vA1	A:x,y,z->A:-X-2,Y,-Z	Periplasmic binding protein-like II	Interaction Interface Pymol
e3i6vA1	A:-X-2,Y,-Z->A:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e3i6vA2	A:-X-2,Y,-Z->A:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol
e3i6vA1	A:x,y,z->A:-X-1,Y,-Z	Periplasmic binding protein-like II	Interaction Interface Pymol
e3i6vA1	A:-X-1,Y,-Z->A:x,y,z	Periplasmic binding protein-like II	Interaction Interface Pymol