Domain ID e3i6vA1

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  • A: a/b three-layered sandwiches
  • X: Periplasmic binding protein-like II
  • H: Periplasmic binding protein-like II
  • T: Periplasmic binding protein-like II
  • F: SBP_bac_3
UID: 001520963
Type: Automatic domain
Parent: e1wdnA2
Range: A:52-136,A:225-269
Ligands: GOL LYS NA
PDB: 3i6v
PDB Description: periplasmic His/Glu/Gln/Arg/opine family-binding protein
UniProt: Q5LTV6
Species: Ruegeria pomeroyi

Structure of domain e3i6vA1

Structural contacts of domain e3i6vA1 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3i6vA2 A:x,y,z->A:-Y-1,-X-1,-Z-1/4 Periplasmic binding protein-like II Interaction Interface Pymol
e3i6vA2 A:-Y-1,-X-1,-Z-1/4->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e3i6vA2 A:x,y,z->A:-X-2,Y,-Z Periplasmic binding protein-like II Interaction Interface Pymol
e3i6vA1 A:x,y,z->A:-X-2,Y,-Z Periplasmic binding protein-like II Interaction Interface Pymol
e3i6vA1 A:-X-2,Y,-Z->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e3i6vA2 A:-X-2,Y,-Z->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e3i6vA1 A:x,y,z->A:-X-1,Y,-Z Periplasmic binding protein-like II Interaction Interface Pymol
e3i6vA1 A:-X-1,Y,-Z->A:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol