Domain ID e3iceD4

Download files:
  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: ATP-synt_ab
UID: 001233441
Type: Automatic domain
Parent: e2jdiA3
Range: D:128-415
Ligands: ADP BEF MG
PDB: 3ice
PDB Description: Transcription termination factor rho
UniProt: P0AG30
Species:

Structure of domain e3iceD4

Domains in the same chain:

Download Pymol

e3iceD2 D:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e3iceD5 D:48-127 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3iceD4 D:128-415 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e3iceA2 A:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e3iceA5 A:48-127 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3iceA4 A:128-415 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3iceB2 B:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e3iceB5 B:48-127 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3iceB4 B:128-415 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3iceC2 C:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e3iceC5 C:48-127 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3iceC4 C:128-415 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3iceD2 D:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e3iceD5 D:48-127 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3iceD4 D:128-415 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3iceE12 E:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e3iceE11 E:48-127 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3iceE10 E:128-415 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3iceF1 F:1-10,F:30-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e3iceF2 F:48-127 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3iceF3 F:128-415 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e3iceD4 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3iceE10 D:X,Y,Z->E:x,y,z P-loop domains-related Interaction Interface Pymol
e3iceC4 D:x,y,z->C:X,Y,Z P-loop domains-related Interaction Interface Pymol
e3iceD5 D:x,y,z->D:X-1,Y,Z Nucleic acid-binding proteins Interaction Interface Pymol