Domain ID e3ig1A5

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  • A: mixed a+b and a/b
  • X: Ribonuclease H-like
  • H: RNaseH-like domain in reverse transcriptase
  • T: RNaseH-like domain in reverse transcriptase
  • F: RVT_connect
UID: 001186530
Type: Automatic domain
Parent: e2zd1B3
Range: A:317-428
PDB: 3ig1
PDB Description: HIV-1 Reverse Transcriptase p66 subunit
UniProt: P03366
Species:

Structure of domain e3ig1A5

Domains in the same chain:

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e3ig1A7 A:3-240 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3ig1A6 A:241-316 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3ig1A5 A:317-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase
e3ig1A3 A:429-554 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like

Domains in the same PDB:

e3ig1A7 A:3-240 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3ig1A6 A:241-316 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3ig1A5 A:317-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase
e3ig1A3 A:429-554 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3ig1B2 B:7-234 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3ig1B1 B:235-308 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3ig1B3 B:309-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase

Structural contacts of domain e3ig1A5 of H-group "RNaseH-like domain in reverse transcriptase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3ig1B2 A:X,Y,Z->B:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3ig1B3 A:X,Y,Z->B:x,y,z RNaseH-like domain in reverse transcriptase Interaction Interface Pymol
e3ig1B3 A:x,y,z->B:X,Y-1,Z RNaseH-like domain in reverse transcriptase Interaction Interface Pymol
e3ig1B3 A:x,y,z->B:-X+1/2,Y-1/2,-Z RNaseH-like domain in reverse transcriptase Interaction Interface Pymol
e3ig1B1 A:x,y,z->B:-X+1/2,Y-1/2,-Z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol