Domain ID e3ii6Y6

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  • A: a/b three-layered sandwiches
  • X: BRCT domain
  • H: BRCT domain
  • T: BRCT domain
  • F: BRCT
UID: 001174822
Type: Automatic domain
Parent: e1t15A2
Range: Y:785-911
PDB: 3ii6
PDB Description: DNA ligase 4
UniProt: P49917
Hsap BLAST neighbor: P49917
Species: Homo sapiens

Structure of domain e3ii6Y6

Domains in the same chain:

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e3ii6Y2 Y:654-759 BRCT domain BRCT domain BRCT domain
e3ii6Y6 Y:785-911 BRCT domain BRCT domain BRCT domain

Domains in the same PDB:

e3ii6A1 A:1-49,A:81-117 XRCC4, N-terminal domain-like XRCC4, N-terminal domain XRCC4, N-terminal domain
e3ii6A2 A:50-76 HTH HTH HTH motif inserted in other structures
e3ii6A3 A:118-201 XRCC4 C-terminal oligomerization domain XRCC4 C-terminal oligomerization domain XRCC4 C-terminal oligomerization domain
e3ii6B1 B:1-49,B:77-112 XRCC4, N-terminal domain-like XRCC4, N-terminal domain XRCC4, N-terminal domain
e3ii6B2 B:50-76 HTH HTH HTH motif inserted in other structures
e3ii6B3 B:118-201 XRCC4 C-terminal oligomerization domain XRCC4 C-terminal oligomerization domain XRCC4 C-terminal oligomerization domain
e3ii6C1 C:1-49,C:81-117 XRCC4, N-terminal domain-like XRCC4, N-terminal domain XRCC4, N-terminal domain
e3ii6C2 C:50-76 HTH HTH HTH motif inserted in other structures
e3ii6C3 C:118-201 XRCC4 C-terminal oligomerization domain XRCC4 C-terminal oligomerization domain XRCC4 C-terminal oligomerization domain
e3ii6D1 D:1-49,D:77-111 XRCC4, N-terminal domain-like XRCC4, N-terminal domain XRCC4, N-terminal domain
e3ii6D2 D:50-76 HTH HTH HTH motif inserted in other structures
e3ii6D3 D:118-201 XRCC4 C-terminal oligomerization domain XRCC4 C-terminal oligomerization domain XRCC4 C-terminal oligomerization domain
e3ii6X3 X:654-759 BRCT domain BRCT domain BRCT domain
e3ii6X2 X:787-911 BRCT domain BRCT domain BRCT domain
e3ii6Y2 Y:654-759 BRCT domain BRCT domain BRCT domain
e3ii6Y6 Y:785-911 BRCT domain BRCT domain BRCT domain

Structural contacts of domain e3ii6Y6 of H-group "BRCT domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3ii6D3 Y:x,y,z->D:X,Y,Z XRCC4 C-terminal oligomerization domain Interaction Interface Pymol
e3ii6C3 Y:x,y,z->C:X,Y,Z XRCC4 C-terminal oligomerization domain Interaction Interface Pymol
e3ii6C3 Y:x,y,z->X:X,Y-1,Z+1 XRCC4 C-terminal oligomerization domain Interaction Interface Pymol
e3ii6C3 Y:x,y,z->Y:X,Y-1,Z XRCC4 C-terminal oligomerization domain Interaction Interface Pymol
e3ii6B2 Y:X,Y,Z-1->B:x,y,z HTH Interaction Interface Pymol