ECOD: domain e3iibA5

Domain ID e3iibA5

A: a/b three-layered sandwiches
X: Phosphorylase/hydrolase-like
H: Zn-dependent exopeptidases
T: Zn-dependent exopeptidases
F: Peptidase_M28

UID:	001258522
Type:	Automatic domain
Parent:	e1rtqA1
Range:	A:25-99,A:251-466
Ligands:	PEG PGE ZN
PDB:	3iib
PDB Description:	Peptidase M28
UniProt:	A1S420
Hsap BLAST neighbor:	Q9Y646
Species:

Domains in the same chain:

Download Pymol

e3iibA5	A:25-99,A:251-466	Phosphorylase/hydrolase-like	Zn-dependent exopeptidases	Zn-dependent exopeptidases
e3iibA6	A:100-250	The "swivelling" beta/beta/alpha domains	The "swivelling" beta/beta/alpha domain	The "swivelling" beta/beta/alpha domain

Domains in the same PDB:

e3iibA5	A:25-99,A:251-466	Phosphorylase/hydrolase-like	Zn-dependent exopeptidases	Zn-dependent exopeptidases
e3iibA6	A:100-250	The "swivelling" beta/beta/alpha domains	The "swivelling" beta/beta/alpha domain	The "swivelling" beta/beta/alpha domain

Structural contacts of domain e3iibA5 of H-group "Zn-dependent exopeptidases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3iibA6	A:x,y,z->A:-X,Y,-Z	The "swivelling" beta/beta/alpha domain	Interaction Interface Pymol
e3iibA6	A:-X,Y,-Z->A:x,y,z	The "swivelling" beta/beta/alpha domain	Interaction Interface Pymol
e3iibA5	A:x,y,z->A:-X+1,Y,-Z+1	Zn-dependent exopeptidases	Interaction Interface Pymol
e3iibA5	A:-X+1,Y,-Z+1->A:x,y,z	Zn-dependent exopeptidases	Interaction Interface Pymol
e3iibA5	A:x,y,z->A:-X+1/2,Y-1/2,-Z+1	Zn-dependent exopeptidases	Interaction Interface Pymol
e3iibA5	A:-X+1/2,Y-1/2,-Z+1->A:x,y,z	Zn-dependent exopeptidases	Interaction Interface Pymol
e3iibA6	A:X-1/2,Y-1/2,Z->A:x,y,z	The "swivelling" beta/beta/alpha domain	Interaction Interface Pymol