| UID: | 000381008 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1sg1X3 |
| Range: | Y:96-137 |
| PDB: | 3ij2 |
| PDB Description: | Nerve growth factor receptor (TNFR superfamily, member 16) |
| UniProt: | P07174 |
| Hsap BLAST neighbor: | P08138 |
| Species: | Rattus norvegicus |
Structure of domain e3ij2Y3
Domains in the same chain:
| e3ij2Y1 | Y:2-56 | EGF-like | EGF-related | TNF receptor-like |
| e3ij2Y2 | Y:57-95 | EGF-like | EGF-related | TNF receptor-like |
| e3ij2Y3 | Y:96-137 | EGF-like | EGF-related | TNF receptor-like |
| e3ij2Y4 | Y:138-161 | EGF-like | EGF-related | TNF receptor-like |
Domains in the same PDB:
| e3ij2A1 | A:8-117 | Cystine-knot cytokines | Cystine-knot cytokines | Cystine-knot cytokines |
| e3ij2B1 | B:8-117 | Cystine-knot cytokines | Cystine-knot cytokines | Cystine-knot cytokines |
| e3ij2X1 | X:2-56 | EGF-like | EGF-related | TNF receptor-like |
| e3ij2X2 | X:57-95 | EGF-like | EGF-related | TNF receptor-like |
| e3ij2X3 | X:96-137 | EGF-like | EGF-related | TNF receptor-like |
| e3ij2X4 | X:138-163 | EGF-like | EGF-related | TNF receptor-like |
| e3ij2Y1 | Y:2-56 | EGF-like | EGF-related | TNF receptor-like |
| e3ij2Y2 | Y:57-95 | EGF-like | EGF-related | TNF receptor-like |
| e3ij2Y3 | Y:96-137 | EGF-like | EGF-related | TNF receptor-like |
| e3ij2Y4 | Y:138-161 | EGF-like | EGF-related | TNF receptor-like |
Structural contacts of domain e3ij2Y3 of H-group "EGF-related":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3ij2A1 | Y:x,y,z->A:X,Y,Z | Cystine-knot cytokines | Interaction Interface Pymol |
| e3ij2B1 | Y:x,y,z->B:X,Y,Z | Cystine-knot cytokines | Interaction Interface Pymol |
| e3ij2X3 | Y:x,y,z->X:-Y+1,X-Y+1,Z-1/3 | EGF-related | Interaction Interface Pymol |
