Domain ID e3ir1A1

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  • A: a/b three-layered sandwiches
  • X: Periplasmic binding protein-like II
  • H: Periplasmic binding protein-like II
  • T: Periplasmic binding protein-like II
  • F: Lipoprotein_9
UID: 001521116
Type: Automatic domain
Parent: e1xs5A3
Range: A:124-236
Ligands: MET SO4
PDB: 3ir1
PDB Description: OUTER MEMBRANE LIPOPROTEIN GNA1946
UniProt: Q7BMQ8
Species: Neisseria meningitidis

Structure of domain e3ir1A1

Domains in the same chain:

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e3ir1A2 A:43-123,A:237-281 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3ir1A1 A:124-236 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II

Domains in the same PDB:

e3ir1A2 A:43-123,A:237-281 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3ir1A1 A:124-236 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3ir1B1 B:43-123,B:237-286 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3ir1B2 B:124-236 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3ir1C1 C:43-123,C:237-281 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3ir1C2 C:124-236 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3ir1D1 D:43-123,D:237-281 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3ir1D2 D:124-236 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3ir1E1 E:43-123,E:237-281 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3ir1E2 E:124-236 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3ir1F2 F:43-123,F:237-286 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e3ir1F1 F:124-236 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II

Structural contacts of domain e3ir1A1 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3ir1C1 A:X,Y,Z->C:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e3ir1C2 A:X,Y,Z->C:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol
e3ir1D2 A:x,y,z->D:X-1/2,-Y-1/2,-Z Periplasmic binding protein-like II Interaction Interface Pymol
e3ir1E2 A:X,Y,Z->E:x,y,z Periplasmic binding protein-like II Interaction Interface Pymol