Domain ID e3ir6B1

Download files:
  • A: a+b two layers
  • X: 4Fe-4S ferredoxin
  • H: 4Fe-4S ferredoxin
  • T: 4Fe-4S ferredoxin
  • F: Fer4_11,Nitr_red_bet_C
UID: 001115401
Type: Automatic domain
Parent: e1y5iB2
Range: B:1-183,B:244-509
Ligands: HEM SF4
PDB: 3ir6
PDB Description: Respiratory nitrate reductase 1 beta chain
UniProt: P11349
Species:

Structure of domain e3ir6B1

Structural contacts of domain e3ir6B1 of H-group "4Fe-4S ferredoxin":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3ir6A2 B:x,y,z->A:X,Y,Z RIFT-related Interaction Interface Pymol
e3ir6A3 B:x,y,z->A:X,Y,Z Formate dehydrogenase/DMSO reductase, domains 2 and 3 Interaction Interface Pymol
e3ir6A1 B:x,y,z->A:X,Y,Z Formate dehydrogenase/DMSO reductase, domains 2 and 3 Interaction Interface Pymol
e3ir6A4 B:x,y,z->A:X,Y,Z Formate dehydrogenase/DMSO reductase, domain 1 Interaction Interface Pymol
e3ir6C1 B:X,Y,Z->C:x,y,z Transmembrane heme-binding four-helical bundle Interaction Interface Pymol
e3ir6B1 B:x,y,z->B:-X-2,Y,-Z-1/2 4Fe-4S ferredoxin Interaction Interface Pymol
e3ir6B2 B:x,y,z->B:-X-2,Y,-Z-1/2 4Fe-4S ferredoxin Interaction Interface Pymol
e3ir6B1 B:-X-2,Y,-Z-1/2->B:x,y,z 4Fe-4S ferredoxin Interaction Interface Pymol
e3ir6B2 B:-X-2,Y,-Z-1/2->B:x,y,z 4Fe-4S ferredoxin Interaction Interface Pymol
e3ir6A4 B:x,y,z->A:-X-2,Y,-Z-1/2 Formate dehydrogenase/DMSO reductase, domain 1 Interaction Interface Pymol
e3ir6A1 B:x,y,z->A:-X-2,Y,-Z-1/2 Formate dehydrogenase/DMSO reductase, domains 2 and 3 Interaction Interface Pymol
e3ir6C1 B:-X-2,Y,-Z-1/2->C:x,y,z Transmembrane heme-binding four-helical bundle Interaction Interface Pymol
e3ir6A3 B:x,y,z->A:X-1/2,-Y-1/2,-Z Formate dehydrogenase/DMSO reductase, domains 2 and 3 Interaction Interface Pymol
e3ir6A1 B:x,y,z->A:X-1/2,-Y-1/2,-Z Formate dehydrogenase/DMSO reductase, domains 2 and 3 Interaction Interface Pymol
e3ir6C1 B:X,-Y,-Z->C:x,y,z Transmembrane heme-binding four-helical bundle Interaction Interface Pymol
e3ir6A1 B:-X-3/2,-Y-1/2,Z-1/2->A:x,y,z Formate dehydrogenase/DMSO reductase, domains 2 and 3 Interaction Interface Pymol