Domain ID e3irxB3

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: Adenylyl and guanylyl cyclase catalytic domain-like
  • F: RVT_1
UID: 000387995
Type: Automatic domain
Parent: e1ztwA1
Range: B:1-228
PDB: 3irx
PDB Description: Reverse transcriptase
UniProt: P03366
Hsap BLAST neighbor: P63135
Species:

Structure of domain e3irxB3

Domains in the same chain:

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e3irxB3 B:1-228 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3irxB1 B:231-304 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3irxB4 B:303-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase

Domains in the same PDB:

e3irxA7 A:0-239 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3irxA6 A:240-316 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3irxA5 A:317-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase
e3irxA3 A:429-554 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3irxB3 B:1-228 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3irxB1 B:231-304 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3irxB4 B:303-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase

Structural contacts of domain e3irxB3 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3irxA5 B:x,y,z->A:X,Y,Z RNaseH-like domain in reverse transcriptase Interaction Interface Pymol
e3irxA7 B:x,y,z->A:X,Y,Z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3irxA7 B:X,Y-1,Z->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3irxA3 B:-X-1/2,Y-1/2,-Z->A:x,y,z Ribonuclease H-like Interaction Interface Pymol
e3irxB3 B:x,y,z->B:-X-1,Y,-Z-1 Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3irxB3 B:-X-1,Y,-Z-1->B:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol