Domain ID e3itaB1

Download files:
  • A: beta sandwiches
  • X: Penicillin-binding protein associated domain
  • H: Penicillin-binding protein associated domain
  • T: Penicillin-binding protein associated domain
  • F: PBP5_C
UID: 000375207
Type: Automatic domain
Parent: e3becA1
Range: B:259-352
Ligands: SO4
PDB: 3ita
PDB Description: D-alanyl-D-alanine carboxypeptidase dacC
UniProt: P08506
Species: Escherichia coli

Structure of domain e3itaB1

Domains in the same chain:

e3itaB3 B:6-36,B:156-258 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e3itaB2 B:37-155 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e3itaB1 B:259-352 Penicillin-binding protein associated domain Penicillin-binding protein associated domain Penicillin-binding protein associated domain

Domains in the same PDB:

e3itaA3 A:5-36,A:156-258 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e3itaA2 A:37-155 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e3itaA1 A:259-352 Penicillin-binding protein associated domain Penicillin-binding protein associated domain Penicillin-binding protein associated domain
e3itaB3 B:6-36,B:156-258 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e3itaB2 B:37-155 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e3itaB1 B:259-352 Penicillin-binding protein associated domain Penicillin-binding protein associated domain Penicillin-binding protein associated domain
e3itaC5 C:6-36,C:156-258 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e3itaC4 C:37-155 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e3itaC3 C:259-352 Penicillin-binding protein associated domain Penicillin-binding protein associated domain Penicillin-binding protein associated domain
e3itaD5 D:3-36,D:156-258 Profilin-like a+b domain in beta-lactamase/transpeptidase-like proteins a+b domain in beta-lactamase/transpeptidase-like proteins
e3itaD4 D:37-155 alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins alpha-helical domain in beta-lactamase/transpeptidase-like proteins
e3itaD2 D:259-352 Penicillin-binding protein associated domain Penicillin-binding protein associated domain Penicillin-binding protein associated domain

Structural contacts of domain e3itaB1 of H-group "Penicillin-binding protein associated domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3itaA2 B:x,y,z->A:-X,Y-1/2,-Z alpha-helical domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol
e3itaD5 B:x,y,z->D:X-1,Y,Z a+b domain in beta-lactamase/transpeptidase-like proteins Interaction Interface Pymol
e3itaD2 B:x,y,z->D:X-1,Y,Z Penicillin-binding protein associated domain Interaction Interface Pymol
e3itaA1 B:x,y,z->A:-X-1,Y-1/2,-Z Penicillin-binding protein associated domain Interaction Interface Pymol
e3itaD2 B:X,Y,Z->D:x,y,z Penicillin-binding protein associated domain Interaction Interface Pymol