ECOD: domain e3ixqC1

Domain ID e3ixqC1

A: a+b two layers
X: Alpha-beta plaits
H: D-ribose-5-phosphate isomerase (RpiA), lid domain
T: D-ribose-5-phosphate isomerase (RpiA), lid domain
F: Rib_5-P_isom_A

UID:	000374351
Type:	Automatic domain
Parent:	e1uj4A1
Range:	C:130-208
PDB:	3ixq
PDB Description:	Ribose-5-phosphate isomerase A
UniProt:	Q58998
Hsap BLAST neighbor:	P49247
Species:	Methanocaldococcus jannaschii

Domains in the same chain:

Download Pymol

e3ixqC2	C:2-129,C:206-226	Rossmann-like	Rossmann-related	NagB/RpiA/CoA transferase-like
e3ixqC1	C:130-208	Alpha-beta plaits	D-ribose-5-phosphate isomerase (RpiA), lid domain	D-ribose-5-phosphate isomerase (RpiA), lid domain

Domains in the same PDB:

e3ixqA3	A:2-129,A:206-226	Rossmann-like	Rossmann-related	NagB/RpiA/CoA transferase-like
e3ixqA4	A:130-205	Alpha-beta plaits	D-ribose-5-phosphate isomerase (RpiA), lid domain	D-ribose-5-phosphate isomerase (RpiA), lid domain
e3ixqB2	B:2-129,B:206-226	Rossmann-like	Rossmann-related	NagB/RpiA/CoA transferase-like
e3ixqB1	B:130-208	Alpha-beta plaits	D-ribose-5-phosphate isomerase (RpiA), lid domain	D-ribose-5-phosphate isomerase (RpiA), lid domain
e3ixqC2	C:2-129,C:206-226	Rossmann-like	Rossmann-related	NagB/RpiA/CoA transferase-like
e3ixqC1	C:130-208	Alpha-beta plaits	D-ribose-5-phosphate isomerase (RpiA), lid domain	D-ribose-5-phosphate isomerase (RpiA), lid domain
e3ixqD2	D:2-129,D:206-226	Rossmann-like	Rossmann-related	NagB/RpiA/CoA transferase-like
e3ixqD1	D:130-208	Alpha-beta plaits	D-ribose-5-phosphate isomerase (RpiA), lid domain	D-ribose-5-phosphate isomerase (RpiA), lid domain

Structural contacts of domain e3ixqC1 of H-group "D-ribose-5-phosphate isomerase (RpiA), lid domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3ixqB2	C:x,y,z->B:X,Y,Z	Rossmann-related	Interaction Interface Pymol
e3ixqB1	C:x,y,z->B:X,Y,Z	D-ribose-5-phosphate isomerase (RpiA), lid domain	Interaction Interface Pymol
e3ixqD1	C:X,Y,Z->D:x,y,z	D-ribose-5-phosphate isomerase (RpiA), lid domain	Interaction Interface Pymol
e3ixqD2	C:X,Y,Z->D:x,y,z	Rossmann-related	Interaction Interface Pymol
e3ixqD2	C:x,y,z->D:-X,Y-1/2,-Z	Rossmann-related	Interaction Interface Pymol
e3ixqB1	C:x,y,z->B:X-1,Y,Z	D-ribose-5-phosphate isomerase (RpiA), lid domain	Interaction Interface Pymol