Domain ID e3iyfM5

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  • A: alpha bundles
  • X: GroEL equatorial domain-like
  • H: GroEL equatorial domain-like
  • T: GroEL equatorial domain-like
  • F: Cpn60_TCP1
UID: 001174047
Type: Automatic domain
Parent: e1kp8A1
Range: M:7-143,M:363-497
PDB: 3iyf
PDB Description: Chaperonin
UniProt: Q877G8
Hsap BLAST neighbor: P49368
Species: Methanococcus maripaludis

Structure of domain e3iyfM5

Domains in the same chain:

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e3iyfM5 M:7-143,M:363-497 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e3iyfM6 M:144-203,M:328-362 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e3iyfM4 M:204-327 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain

Domains in the same PDB:

e3iyfA5 A:7-143,A:363-497 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e3iyfA6 A:144-203,A:328-362 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e3iyfA4 A:204-327 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e3iyfB5 B:7-143,B:363-497 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e3iyfB6 B:144-203,B:328-362 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e3iyfB4 B:204-327 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e3iyfC5 C:7-143,C:363-497 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e3iyfC6 C:144-203,C:328-362 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e3iyfC4 C:204-327 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e3iyfD8 D:7-143,D:363-497 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e3iyfD9 D:144-203,D:328-362 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e3iyfD7 D:204-327 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e3iyfE8 E:7-143,E:363-497 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e3iyfE9 E:144-203,E:328-362 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e3iyfE7 E:204-327 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e3iyfF5 F:7-143,F:363-497 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e3iyfF6 F:144-203,F:328-362 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e3iyfF4 F:204-327 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e3iyfG5 G:7-143,G:363-497 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e3iyfG6 G:144-203,G:328-362 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e3iyfG4 G:204-327 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e3iyfH5 H:7-143,H:363-497 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e3iyfH6 H:144-203,H:328-362 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e3iyfH4 H:204-327 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e3iyfI5 I:7-143,I:363-497 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e3iyfI6 I:144-203,I:328-362 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e3iyfI4 I:204-327 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e3iyfJ5 J:7-143,J:363-497 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e3iyfJ6 J:144-203,J:328-362 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e3iyfJ4 J:204-327 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e3iyfK5 K:7-143,K:363-497 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e3iyfK6 K:144-203,K:328-362 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e3iyfK4 K:204-327 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e3iyfL5 L:7-143,L:363-497 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e3iyfL6 L:144-203,L:328-362 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e3iyfL4 L:204-327 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e3iyfM5 M:7-143,M:363-497 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e3iyfM6 M:144-203,M:328-362 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e3iyfM4 M:204-327 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e3iyfN5 N:7-143,N:363-497 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e3iyfN6 N:144-203,N:328-362 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e3iyfN4 N:204-327 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e3iyfO5 O:7-143,O:363-497 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e3iyfO6 O:144-203,O:328-362 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e3iyfO4 O:204-327 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e3iyfP5 P:7-143,P:363-497 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e3iyfP6 P:144-203,P:328-362 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e3iyfP4 P:204-327 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain

Structural contacts of domain e3iyfM5 of H-group "GroEL equatorial domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3iyfL5 M:X,Y,Z->L:x,y,z GroEL equatorial domain-like Interaction Interface Pymol
e3iyfN5 M:x,y,z->N:X,Y,Z GroEL equatorial domain-like Interaction Interface Pymol
e3iyfD8 M:X,Y,Z->D:x,y,z GroEL equatorial domain-like Interaction Interface Pymol