Domain ID e3iylU1

Download files:
  • A: alpha complex topology
  • X: Core protein VP6
  • H: Core protein VP6
  • T: Core protein VP6
  • F: Sigma_1_2
UID: 000119417
Type: Manual and representative domain
Range: U:2-412
PDB: 3iyl
PDB Description: Core protein VP6
UniProt: Q8JU64
Species:

Structure of domain e3iylU1

Domains in the same chain:

Download Pymol

e3iylU1 U:2-412 Core protein VP6 Core protein VP6 Core protein VP6

Domains in the same PDB:

e3iyl.1 A:2-42,B:43-250 a+b domain in membrane penetration protein mu1 a+b domain in membrane penetration protein mu1 a+b domain in membrane penetration protein mu1
e3iylB1 B:251-287,B:472-646 Alpha-helical domain in membrane penetration protein mu1 Alpha-helical domain in membrane penetration protein mu1 Alpha-helical domain in membrane penetration protein mu1
e3iylB2 B:288-471 jelly-roll Jelly-roll domain in membrane penetration protein mu1 Jelly-roll domain in membrane penetration protein mu1
e3iyl.2 C:2-42,D:43-250 a+b domain in membrane penetration protein mu1 a+b domain in membrane penetration protein mu1 a+b domain in membrane penetration protein mu1
e3iylD3 D:251-287,D:472-646 Alpha-helical domain in membrane penetration protein mu1 Alpha-helical domain in membrane penetration protein mu1 Alpha-helical domain in membrane penetration protein mu1
e3iylD2 D:288-471 jelly-roll Jelly-roll domain in membrane penetration protein mu1 Jelly-roll domain in membrane penetration protein mu1
e3iyl.3 E:2-42,F:43-250 a+b domain in membrane penetration protein mu1 a+b domain in membrane penetration protein mu1 a+b domain in membrane penetration protein mu1
e3iylF3 F:251-287,F:472-646 Alpha-helical domain in membrane penetration protein mu1 Alpha-helical domain in membrane penetration protein mu1 Alpha-helical domain in membrane penetration protein mu1
e3iylF2 F:288-471 jelly-roll Jelly-roll domain in membrane penetration protein mu1 Jelly-roll domain in membrane penetration protein mu1
e3iyl.4 G:2-42,H:43-250 a+b domain in membrane penetration protein mu1 a+b domain in membrane penetration protein mu1 a+b domain in membrane penetration protein mu1
e3iylH3 H:251-287,H:472-646 Alpha-helical domain in membrane penetration protein mu1 Alpha-helical domain in membrane penetration protein mu1 Alpha-helical domain in membrane penetration protein mu1
e3iylH2 H:288-471 jelly-roll Jelly-roll domain in membrane penetration protein mu1 Jelly-roll domain in membrane penetration protein mu1
e3iyl.5 I:2-42,J:43-250 a+b domain in membrane penetration protein mu1 a+b domain in membrane penetration protein mu1 a+b domain in membrane penetration protein mu1
e3iylJ3 J:251-287,J:472-646 Alpha-helical domain in membrane penetration protein mu1 Alpha-helical domain in membrane penetration protein mu1 Alpha-helical domain in membrane penetration protein mu1
e3iylJ2 J:288-471 jelly-roll Jelly-roll domain in membrane penetration protein mu1 Jelly-roll domain in membrane penetration protein mu1
e3iyl.6 K:2-42,L:43-250 a+b domain in membrane penetration protein mu1 a+b domain in membrane penetration protein mu1 a+b domain in membrane penetration protein mu1
e3iylL3 L:251-287,L:472-646 Alpha-helical domain in membrane penetration protein mu1 Alpha-helical domain in membrane penetration protein mu1 Alpha-helical domain in membrane penetration protein mu1
e3iylL2 L:288-471 jelly-roll Jelly-roll domain in membrane penetration protein mu1 Jelly-roll domain in membrane penetration protein mu1
e3iyl.7 M:2-42,N:43-250 a+b domain in membrane penetration protein mu1 a+b domain in membrane penetration protein mu1 a+b domain in membrane penetration protein mu1
e3iylN3 N:251-287,N:472-646 Alpha-helical domain in membrane penetration protein mu1 Alpha-helical domain in membrane penetration protein mu1 Alpha-helical domain in membrane penetration protein mu1
e3iylN2 N:288-471 jelly-roll Jelly-roll domain in membrane penetration protein mu1 Jelly-roll domain in membrane penetration protein mu1
e3iyl.8 O:2-42,P:43-250 a+b domain in membrane penetration protein mu1 a+b domain in membrane penetration protein mu1 a+b domain in membrane penetration protein mu1
e3iylP3 P:251-287,P:472-646 Alpha-helical domain in membrane penetration protein mu1 Alpha-helical domain in membrane penetration protein mu1 Alpha-helical domain in membrane penetration protein mu1
e3iylP2 P:288-471 jelly-roll Jelly-roll domain in membrane penetration protein mu1 Jelly-roll domain in membrane penetration protein mu1
e3iyl.9 Q:2-42,R:43-250 a+b domain in membrane penetration protein mu1 a+b domain in membrane penetration protein mu1 a+b domain in membrane penetration protein mu1
e3iylR3 R:251-287,R:472-646 Alpha-helical domain in membrane penetration protein mu1 Alpha-helical domain in membrane penetration protein mu1 Alpha-helical domain in membrane penetration protein mu1
e3iylR2 R:288-471 jelly-roll Jelly-roll domain in membrane penetration protein mu1 Jelly-roll domain in membrane penetration protein mu1
e3iyl.10 S:2-42,T:43-250 a+b domain in membrane penetration protein mu1 a+b domain in membrane penetration protein mu1 a+b domain in membrane penetration protein mu1
e3iylT3 T:251-287,T:472-646 Alpha-helical domain in membrane penetration protein mu1 Alpha-helical domain in membrane penetration protein mu1 Alpha-helical domain in membrane penetration protein mu1
e3iylT2 T:288-471 jelly-roll Jelly-roll domain in membrane penetration protein mu1 Jelly-roll domain in membrane penetration protein mu1
e3iylU1 U:2-412 Core protein VP6 Core protein VP6 Core protein VP6
e3iylV1 V:2-412 Core protein VP6 Core protein VP6 Core protein VP6
e3iylW1 W:2-143 Rotavirus NSP2 fragment, N-terminal domain Rotavirus NSP2 fragment, N-terminal domain Rotavirus NSP2 fragment, N-terminal domain
e3iylW2 W:144-390 HIT-like HIT-related HIT-related
e3iylW3 W:391-435,W:694-804 ferredoxin-like domain in VP1 ferredoxin-like domain in VP1 ferredoxin-like domain in VP1
e3iylW4 W:436-693 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e3iylW5 W:805-1031 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e3iylW6 W:1032-1130 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3iylW7 W:1131-1232 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3iylW8 W:1233-1298 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3iylX1 X:188-1211 Inner layer core protein p3-related Inner layer core protein p3-related Inner layer core protein p3-related
e3iylY2 Y:15-141 beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers beta-beta-alpha zinc fingers
e3iylY1 Y:155-1214 Inner layer core protein p3-related Inner layer core protein p3-related Inner layer core protein p3-related

Structural contacts of domain e3iylU1 of H-group "Core protein VP6":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3iylX1 U:x,y,z->X:X,Y,Z Inner layer core protein p3-related Interaction Interface Pymol
e3iylW2 U:x,y,z->W:X,Y,Z HIT-related Interaction Interface Pymol
e3iyl.8 U:X,Y,Z->P:x,y,z a+b domain in membrane penetration protein mu1 Interaction Interface Pymol