ECOD: domain e3iynB2

Domain ID e3iynB2

A: beta sandwiches
X: jelly-roll
H: Nucleoplasmin-like/VP (viral coat and capsid proteins)
T: Nucleoplasmin-like/VP (viral coat and capsid proteins)
F: Adeno_hexon_C

UID:	000399565
Type:	Automatic domain
Parent:	e1p2zA2
Range:	B:625-949
PDB:	3iyn
PDB Description:
UniProt:	P04133
Species:

Domain
In chain context
In PDB context

Structure of domain e3iynB2

Domains in the same chain:

Download Pymol

e3iynB1	B:6-135,B:165-624	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3iynB2	B:625-949	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)

Domains in the same PDB:

Structural contacts of domain e3iynB2 of H-group "Nucleoplasmin-like/VP (viral coat and capsid proteins)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3iynC1	B:x,y,z->C:X,Y,Z	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Interaction Interface Pymol
e3iynA1	B:X,Y,Z->A:x,y,z	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Interaction Interface Pymol
e3iynM2	B:x,y,z->M:X,Y,Z	Jelly-roll domain in Adenovirus penton base protein	Interaction Interface Pymol
e3iynM2	B:x,y,z->N:X,Y,Z	Jelly-roll domain in Adenovirus penton base protein	Interaction Interface Pymol

e3iynA1	A:6-135,A:165-624	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3iynA2	A:625-949	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3iynB1	B:6-135,B:165-624	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3iynB2	B:625-949	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3iynC1	C:2-135,C:165-624	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3iynC2	C:625-950	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3iynD1	D:5-135,D:165-624	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3iynD2	D:625-949	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3iynE1	E:5-135,E:165-624	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3iynE2	E:625-950	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3iynF1	F:5-135,F:165-624	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3iynF2	F:625-950	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3iynG1	G:5-135,G:165-624	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3iynG2	G:625-950	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3iynH1	H:2-135,H:165-624	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3iynH2	H:625-949	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3iynI1	I:5-135,I:165-624	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3iynI2	I:625-950	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3iynJ1	J:5-135,J:165-624	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3iynJ2	J:625-951	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3iynK1	K:3-135,K:165-624	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3iynK2	K:625-950	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3iynL1	L:2-135,L:165-624	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3iynL2	L:625-949	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3iynM2	M:37-140,M:434-569	jelly-roll	Jelly-roll domain in Adenovirus penton base protein	Jelly-roll domain in Adenovirus penton base protein
e3iynM1	M:134-296,M:375-433	Insertion domain in Adenovirus penton base protein	Insertion domain in Adenovirus penton base protein	Insertion domain in Adenovirus penton base protein
e3iynN1	N:7-132	N-terminal domain of hexon-associated protein (IIIa)	N-terminal domain of hexon-associated protein (IIIa)	N-terminal domain of hexon-associated protein (IIIa)
e3iynN2	N:133-300	Middle domain of hexon-associated protein (IIIa)	Middle domain of hexon-associated protein (IIIa)	Middle domain of hexon-associated protein (IIIa)