Domain ID e3iyuX3

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  • A: alpha complex topology
  • X: Helical domain in outer capsid protein VP4
  • H: Helical domain in outer capsid protein VP4
  • T: Helical domain in outer capsid protein VP4
  • F: VP4_helical
UID: 000185361
Type: Manual and representative domain
Range: X:1-48,X:484-776
PDB: 3iyu
PDB Description:
Species:

Structure of domain e3iyuX3

Domains in the same chain:

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e3iyuX3 X:1-48,X:484-776 Helical domain in outer capsid protein VP4 Helical domain in outer capsid protein VP4 Helical domain in outer capsid protein VP4
e3iyuX1 X:65-224 jelly-roll Concanavalin A-like Concanavalin A-like lectins/glucanases
e3iyuX2 X:250-483 VP4 membrane interaction domain VP4 membrane interaction domain VP4 membrane interaction domain

Domains in the same PDB:

e3iyuA2 A:58-162,A:255-312 Flavodoxin-like Flavodoxin-like domain in outer capsid glycoprotein VP7 Flavodoxin-like domain in outer capsid glycoprotein VP7
e3iyuA1 A:161-254 jelly-roll Jelly-roll domain in outer capsid glycoprotein VP7 Jelly-roll domain in outer capsid glycoprotein VP7
e3iyuF2 F:58-162,F:255-320 Flavodoxin-like Flavodoxin-like domain in outer capsid glycoprotein VP7 Flavodoxin-like domain in outer capsid glycoprotein VP7
e3iyuF1 F:161-254 jelly-roll Jelly-roll domain in outer capsid glycoprotein VP7 Jelly-roll domain in outer capsid glycoprotein VP7
e3iyuG2 G:57-161,G:254-319 Flavodoxin-like Flavodoxin-like domain in outer capsid glycoprotein VP7 Flavodoxin-like domain in outer capsid glycoprotein VP7
e3iyuG1 G:160-253 jelly-roll Jelly-roll domain in outer capsid glycoprotein VP7 Jelly-roll domain in outer capsid glycoprotein VP7
e3iyuH2 H:58-162,H:255-312 Flavodoxin-like Flavodoxin-like domain in outer capsid glycoprotein VP7 Flavodoxin-like domain in outer capsid glycoprotein VP7
e3iyuH1 H:161-254 jelly-roll Jelly-roll domain in outer capsid glycoprotein VP7 Jelly-roll domain in outer capsid glycoprotein VP7
e3iyuI2 I:57-161,I:254-319 Flavodoxin-like Flavodoxin-like domain in outer capsid glycoprotein VP7 Flavodoxin-like domain in outer capsid glycoprotein VP7
e3iyuI1 I:160-253 jelly-roll Jelly-roll domain in outer capsid glycoprotein VP7 Jelly-roll domain in outer capsid glycoprotein VP7
e3iyuJ2 J:57-161,J:254-319 Flavodoxin-like Flavodoxin-like domain in outer capsid glycoprotein VP7 Flavodoxin-like domain in outer capsid glycoprotein VP7
e3iyuJ1 J:160-253 jelly-roll Jelly-roll domain in outer capsid glycoprotein VP7 Jelly-roll domain in outer capsid glycoprotein VP7
e3iyuK2 K:56-160,K:253-318 Flavodoxin-like Flavodoxin-like domain in outer capsid glycoprotein VP7 Flavodoxin-like domain in outer capsid glycoprotein VP7
e3iyuK1 K:159-252 jelly-roll Jelly-roll domain in outer capsid glycoprotein VP7 Jelly-roll domain in outer capsid glycoprotein VP7
e3iyuL2 L:57-161,L:254-319 Flavodoxin-like Flavodoxin-like domain in outer capsid glycoprotein VP7 Flavodoxin-like domain in outer capsid glycoprotein VP7
e3iyuL1 L:160-253 jelly-roll Jelly-roll domain in outer capsid glycoprotein VP7 Jelly-roll domain in outer capsid glycoprotein VP7
e3iyuM2 M:58-162,M:255-312 Flavodoxin-like Flavodoxin-like domain in outer capsid glycoprotein VP7 Flavodoxin-like domain in outer capsid glycoprotein VP7
e3iyuM1 M:161-254 jelly-roll Jelly-roll domain in outer capsid glycoprotein VP7 Jelly-roll domain in outer capsid glycoprotein VP7
e3iyuN2 N:57-161,N:254-319 Flavodoxin-like Flavodoxin-like domain in outer capsid glycoprotein VP7 Flavodoxin-like domain in outer capsid glycoprotein VP7
e3iyuN1 N:160-253 jelly-roll Jelly-roll domain in outer capsid glycoprotein VP7 Jelly-roll domain in outer capsid glycoprotein VP7
e3iyuO2 O:57-161,O:254-319 Flavodoxin-like Flavodoxin-like domain in outer capsid glycoprotein VP7 Flavodoxin-like domain in outer capsid glycoprotein VP7
e3iyuO1 O:160-253 jelly-roll Jelly-roll domain in outer capsid glycoprotein VP7 Jelly-roll domain in outer capsid glycoprotein VP7
e3iyuP2 P:58-162,P:255-320 Flavodoxin-like Flavodoxin-like domain in outer capsid glycoprotein VP7 Flavodoxin-like domain in outer capsid glycoprotein VP7
e3iyuP1 P:161-254 jelly-roll Jelly-roll domain in outer capsid glycoprotein VP7 Jelly-roll domain in outer capsid glycoprotein VP7
e3iyuQ2 Q:58-162,Q:255-312 Flavodoxin-like Flavodoxin-like domain in outer capsid glycoprotein VP7 Flavodoxin-like domain in outer capsid glycoprotein VP7
e3iyuQ1 Q:161-254 jelly-roll Jelly-roll domain in outer capsid glycoprotein VP7 Jelly-roll domain in outer capsid glycoprotein VP7
e3iyuX3 X:1-48,X:484-776 Helical domain in outer capsid protein VP4 Helical domain in outer capsid protein VP4 Helical domain in outer capsid protein VP4
e3iyuX1 X:65-224 jelly-roll Concanavalin A-like Concanavalin A-like lectins/glucanases
e3iyuX2 X:250-483 VP4 membrane interaction domain VP4 membrane interaction domain VP4 membrane interaction domain
e3iyuY1 Y:1-48,Y:480-776 Helical domain in outer capsid protein VP4 Helical domain in outer capsid protein VP4 Helical domain in outer capsid protein VP4
e3iyuY3 Y:65-224 jelly-roll Concanavalin A-like Concanavalin A-like lectins/glucanases
e3iyuY2 Y:250-483 VP4 membrane interaction domain VP4 membrane interaction domain VP4 membrane interaction domain
e3iyuZ1 Z:1-29,Z:499-776 Helical domain in outer capsid protein VP4 Helical domain in outer capsid protein VP4 Helical domain in outer capsid protein VP4
e3iyuZ2 Z:264-473 VP4 membrane interaction domain VP4 membrane interaction domain VP4 membrane interaction domain

Structural contacts of domain e3iyuX3 of H-group "Helical domain in outer capsid protein VP4":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3iyuY2 X:x,y,z->Y:X,Y,Z VP4 membrane interaction domain Interaction Interface Pymol
e3iyuY1 X:x,y,z->Y:X,Y,Z Helical domain in outer capsid protein VP4 Interaction Interface Pymol
e3iyuZ1 X:x,y,z->Z:X,Y,Z Helical domain in outer capsid protein VP4 Interaction Interface Pymol
e3iyuN1 X:X,Y,Z->N:x,y,z Jelly-roll domain in outer capsid glycoprotein VP7 Interaction Interface Pymol
e3iyuP2 X:X,Y,Z->P:x,y,z Flavodoxin-like domain in outer capsid glycoprotein VP7 Interaction Interface Pymol
e3iyuL2 X:X,Y,Z->L:x,y,z Flavodoxin-like domain in outer capsid glycoprotein VP7 Interaction Interface Pymol
e3iyuO1 X:X,Y,Z->O:x,y,z Jelly-roll domain in outer capsid glycoprotein VP7 Interaction Interface Pymol