Domain ID e3j1901

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  • A: few secondary structure elements
  • X: Rubredoxin-like
  • H: Rubredoxin-related
  • T: Rubredoxin-related
  • F: Ribosomal_L32p
UID: 000149820
Type: Automatic domain
Parent: e2j0151
Range: 0:1-56
PDB: 3j19
PDB Description:
Species:

Structure of domain e3j1901

Domains in the same chain:

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e3j1901 0:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Domains in the same PDB:

e3j1901 0:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3j1921 2:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e3j1931 3:1-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e3j1941 4:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e3j19C3 C:1-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3j19C4 C:125-271 SH3 SH3 SH3
e3j19E1 E:1-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e3j19F1 F:1-177 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e3j19G3 G:1-81 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3j19G4 G:82-176 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3j19H2 H:1-55 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e3j19I2 I:1-71 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e3j19I1 I:72-141 HTH HTH Ribosomal protein L11, C-terminal domain
e3j19J1 J:1-142 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e3j19K1 K:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3j19N1 N:1-120 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e3j19O1 O:2-117 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3j19R1 R:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e3j19S1 S:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e3j19T1 T:1-93 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3j19U1 U:1-102 SH3 SH3 SH3
e3j19V1 V:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e3j19W1 W:6-81 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e3j19X1 X:1-77 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e3j19Y1 Y:1-63 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e3j19Z1 Z:1-58 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e

Structural contacts of domain e3j1901 of H-group "Rubredoxin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3j19S1 0:X,Y,Z->S:x,y,z Ribosomal protein L22 Interaction Interface Pymol
e3j19N1 0:X,Y,Z->N:x,y,z Prokaryotic ribosomal protein L17 Interaction Interface Pymol
e3j19N1 0:X,Y,Z->Q:x,y,z Prokaryotic ribosomal protein L17 Interaction Interface Pymol