ECOD: domain e3j1sA1

Domain ID e3j1sA1

A: beta sandwiches
X: jelly-roll
H: Nucleoplasmin-like/VP (viral coat and capsid proteins)
T: Nucleoplasmin-like/VP (viral coat and capsid proteins)
F: Parvo_coat

UID:	000150453
Type:	Automatic domain
Parent:	e1c8dA1
Range:	A:217-735
PDB:	3j1s
PDB Description:	Capsid protein VP1
UniProt:	P03135
Species:

Domain
In chain context
In PDB context

Structure of domain e3j1sA1

Domains in the same chain:

Download Pymol

e3j1sA1	A:217-735	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)

Domains in the same PDB:

e3j1sA1	A:217-735	jelly-roll	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3j1sH1	H:1-120	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3j1sH2	H:121-218	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3j1sL1	L:1-107	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3j1sL2	L:108-214	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e3j1sA1 of H-group "Nucleoplasmin-like/VP (viral coat and capsid proteins)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3j1sH1	A:x,y,z->H:X,Y,Z	Immunoglobulin-related	Interaction Interface Pymol
e3j1sL1	A:x,y,z->L:X,Y,Z	Immunoglobulin-related	Interaction Interface Pymol