Domain ID e3j26M1

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  • A: beta sandwiches
  • X: jelly-roll
  • H: Nucleoplasmin-like/VP (viral coat and capsid proteins)
  • T: Nucleoplasmin-like/VP (viral coat and capsid proteins)
  • F: Sputnik_MCP_1st
UID: 001547326
Type: Automatic domain
Parent: e3j26A1
Range: M:1-279
PDB: 3j26
PDB Description: capsid protein V20
UniProt: B4YNG0
Species: Sputnik virophage

Structure of domain e3j26M1

Domains in the same chain:

e3j26M1 M:1-279 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3j26M2 M:280-508 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)

Domains in the same PDB:

e3j26A1 A:1-279 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3j26A2 A:280-508 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3j26B1 B:1-279 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3j26B2 B:280-508 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3j26C2 C:1-279 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3j26C1 C:280-508 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3j26D2 D:1-279 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3j26D1 D:280-508 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3j26E1 E:1-279 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3j26E2 E:280-508 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3j26F1 F:1-279 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3j26F2 F:280-508 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3j26G2 G:1-279 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3j26G1 G:280-508 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3j26H1 H:1-279 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3j26H2 H:280-508 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3j26I2 I:1-279 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3j26I1 I:280-508 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3j26J1 J:1-279 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3j26J2 J:280-508 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3j26K1 K:1-279 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3j26K2 K:280-508 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3j26L2 L:1-279 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3j26L1 L:280-508 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3j26M1 M:1-279 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3j26M2 M:280-508 jelly-roll Nucleoplasmin-like/VP (viral coat and capsid proteins) Nucleoplasmin-like/VP (viral coat and capsid proteins)
e3j26N1 N:12-66,N:261-373 jelly-roll Jelly-roll domain in minor capsid protein Jelly-roll domain in minor capsid protein
e3j26N2 N:67-260 Insertion domain of minor capsid protein Insertion domain of minor capsid protein Insertion domain of minor capsid protein

Structural contacts of domain e3j26M1 of H-group "Nucleoplasmin-like/VP (viral coat and capsid proteins)":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3j26L2 M:X,Y,Z->L:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3j26L1 M:X,Y,Z->L:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3j26K2 M:X,Y,Z->K:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol
e3j26K1 M:X,Y,Z->K:x,y,z Nucleoplasmin-like/VP (viral coat and capsid proteins) Interaction Interface Pymol