Domain ID e3j2wL1

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: FMN-binding split barrel
  • F: Peptidase_S3
UID: 001015831
Type: Automatic domain
Parent: e1wykA1
Range: L:3119-3267
PDB: 3j2w
PDB Description: Capsid protein
UniProt: Q5XXP3
Species:

Structure of domain e3j2wL1

Domains in the same chain:

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e3j2wL1 L:3119-3267 cradle loop barrel RIFT-related FMN-binding split barrel

Domains in the same PDB:

e3j2wA2 A:1-292 Viral glycoprotein, central and dimerisation domains-like Viral glycoprotein, central and dimerisation domains Viral glycoprotein, central and dimerisation domains
e3j2wA1 A:293-393 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3j2wB2 B:1001-1292 Viral glycoprotein, central and dimerisation domains-like Viral glycoprotein, central and dimerisation domains Viral glycoprotein, central and dimerisation domains
e3j2wB1 B:1293-1393 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3j2wC2 C:2001-2292 Viral glycoprotein, central and dimerisation domains-like Viral glycoprotein, central and dimerisation domains Viral glycoprotein, central and dimerisation domains
e3j2wC1 C:2293-2393 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3j2wD2 D:3001-3292 Viral glycoprotein, central and dimerisation domains-like Viral glycoprotein, central and dimerisation domains Viral glycoprotein, central and dimerisation domains
e3j2wD1 D:3293-3393 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3j2wE1 E:394-439 Transmembrane helix of E1 envelope glycoprotein Transmembrane helix of E1 envelope glycoprotein Transmembrane helix of E1 envelope glycoprotein
e3j2wF1 F:1394-1439 Transmembrane helix of E1 envelope glycoprotein Transmembrane helix of E1 envelope glycoprotein Transmembrane helix of E1 envelope glycoprotein
e3j2wG1 G:2394-2439 Transmembrane helix of E1 envelope glycoprotein Transmembrane helix of E1 envelope glycoprotein Transmembrane helix of E1 envelope glycoprotein
e3j2wH1 H:3394-3439 Transmembrane helix of E1 envelope glycoprotein Transmembrane helix of E1 envelope glycoprotein Transmembrane helix of E1 envelope glycoprotein
e3j2wI1 I:119-267 cradle loop barrel RIFT-related FMN-binding split barrel
e3j2wJ1 J:1119-1267 cradle loop barrel RIFT-related FMN-binding split barrel
e3j2wK1 K:2119-2267 cradle loop barrel RIFT-related FMN-binding split barrel
e3j2wL1 L:3119-3267 cradle loop barrel RIFT-related FMN-binding split barrel
e3j2wM1 M:507-638 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3j2wM2 M:639-769 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3j2wM3 M:770-842 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3j2wN2 N:1507-1638 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3j2wN3 N:1639-1769 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3j2wN1 N:1770-1842 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3j2wO2 O:2507-2638 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3j2wO3 O:2639-2769 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3j2wO1 O:2770-2842 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3j2wP2 P:3507-3638 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3j2wP3 P:3639-3769 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3j2wP1 P:3770-3842 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e3j2wL1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3j2wH1 L:X,Y,Z->H:x,y,z Transmembrane helix of E1 envelope glycoprotein Interaction Interface Pymol