Domain ID e3j34W2

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  • A: alpha bundles
  • X: Retrovirus capsid protein
  • H: Retrovirus capsid protein N-terminal domain
  • T: Retrovirus capsid protein N-terminal domain
  • F: Gag_p24
UID: 001012664
Type: Automatic domain
Parent: e2pxrC1
Range: W:1-148
PDB: 3j34
PDB Description: capsid protein
UniProt: Q79791
Species: Human immunodeficiency virus 1

Structure of domain e3j34W2

Domains in the same chain:

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e3j34W2 W:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34W1 W:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C

Domains in the same PDB:

e3j3452 5:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j3451 5:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j3462 6:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j3461 6:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j3472 7:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j3471 7:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34a2 a:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34a1 a:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34A2 A:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34A1 A:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34b2 b:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34b1 b:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34B2 B:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34B1 B:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34c2 c:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34c1 c:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34C2 C:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34C1 C:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34d2 d:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34d1 d:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34D2 D:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34D1 D:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34e3 e:1-147 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34e4 e:148-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34E3 E:1-147 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34E4 E:148-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34f3 f:1-147 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34f4 f:148-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34F2 F:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34F1 F:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34g2 g:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34g1 g:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34G2 G:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34G1 G:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34h2 h:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34h1 h:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34H2 H:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34H1 H:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34i3 i:1-146 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34i4 i:147-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34I2 I:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34I1 I:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34j2 j:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34j1 j:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34J2 J:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34J1 J:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34k2 k:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34k1 k:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34K2 K:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34K1 K:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34l2 l:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34l1 l:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34L2 L:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34L1 L:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34m2 m:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34m1 m:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34M2 M:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34M1 M:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34N2 N:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34N1 N:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34O2 O:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34O1 O:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34P2 P:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34P1 P:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34Q2 Q:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34Q1 Q:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34R2 R:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34R1 R:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34S2 S:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34S1 S:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34T2 T:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34T1 T:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34U2 U:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34U1 U:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34V2 V:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34V1 V:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34W2 W:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34W1 W:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34X2 X:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34X1 X:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34Y2 Y:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34Y1 Y:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C
e3j34Z2 Z:1-148 Retrovirus capsid protein Retrovirus capsid protein N-terminal domain Retrovirus capsid protein N-terminal domain
e3j34Z1 Z:149-231 Retrovirus capsid protein Retrovirus capsid protein-C Retrovirus capsid protein-C

Structural contacts of domain e3j34W2 of H-group "Retrovirus capsid protein N-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3j34V2 W:X,Y,Z->V:x,y,z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol
e3j34X1 W:x,y,z->X:X,Y,Z Retrovirus capsid protein-C Interaction Interface Pymol
e3j34X2 W:x,y,z->X:X,Y,Z Retrovirus capsid protein N-terminal domain Interaction Interface Pymol