Domain ID e3j3wJ1

Download files:
  • A: a/b three-layered sandwiches
  • X: Ribosomal protein L13/L15p/L18e/L32e
  • H: Ribosomal protein L13 and L16-A
  • T: Ribosomal protein L13 and L16-A
  • F: Ribosomal_L13
UID: 001030275
Type: Automatic domain
Parent: e4v19N1
Range: J:1-143
PDB: 3j3w
PDB Description: 50S ribosomal protein L13
UniProt: P70974
Hsap BLAST neighbor: Q9BYD1
Species:

Structure of domain e3j3wJ1

Domains in the same chain:

Download Pymol

e3j3wJ1 J:1-143 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A

Domains in the same PDB:

e3j3w01 0:2-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3j3w21 2:1-44 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e3j3w51 5:2-58,5:166-228 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e3j3w63 6:1-73 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e3j3w64 6:74-141 HTH HTH Ribosomal protein L11, C-terminal domain
e3j3wC1 C:1-125 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3j3wC2 C:126-277 SH3 SH3 SH3
e3j3wD1 D:3-208 cradle loop barrel RIFT-related Alanine racemase-C
e3j3wE1 E:2-207 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e3j3wG1 G:9-83 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3j3wG2 G:84-171 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3j3wJ1 J:1-143 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e3j3wK1 K:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3j3wL1 L:1-146 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e3j3wN1 N:1-120 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e3j3wP1 P:3-114 SH3 SH3 SH3
e3j3wQ1 Q:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e3j3wR1 R:1-102 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e3j3wS1 S:1-112 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e3j3wT1 T:1-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3j3wU1 U:1-103 SH3 SH3 SH3
e3j3wX1 X:1-61 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)

Structural contacts of domain e3j3wJ1 of H-group "Ribosomal protein L13 and L16-A":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4v19N1 J:x,y,z->Q:X,Y,Z Ribosomal protein L13 and L16-A Interaction Interface Pymol
e3j3wR1 J:x,y,z->R:X,Y,Z Ribosomal protein L21p Interaction Interface Pymol
e3j3wR1 J:x,y,z->D:X,Y,Z Ribosomal protein L21p Interaction Interface Pymol