ECOD: domain e3j46y1

Domain ID e3j46y1

A: alpha complex topology
X: Preprotein translocase SecY subunit
H: Preprotein translocase SecY subunit
T: Preprotein translocase SecY subunit
F: SecY

UID:	001109696
Type:	Automatic domain
Parent:	e3j01A1
Range:	y:5-441
PDB:	3j46
PDB Description:	Protein translocase subunit SecY
UniProt:	P0AGA2
Species:	Escherichia coli

Domains in the same chain:

Download Pymol

e3j46y1	y:5-441	Preprotein translocase SecY subunit	Preprotein translocase SecY subunit	Preprotein translocase SecY subunit

Domains in the same PDB:

e3j4654	5:1-68,5:160-234	a+b domain in Ribosomal protein L1	a+b domain in Ribosomal protein L1	a+b domain in Ribosomal protein L1
e3j4653	5:69-159	Flavodoxin-like	Rossmann-like domain in Ribosomal protein L1	Rossmann-like domain in Ribosomal protein L1
e3j46E1	E:73-128	Preprotein translocase SecE subunit	Preprotein translocase SecE subunit	Preprotein translocase SecE subunit
e3j46G1	G:8-74	Protein-export membrane protein secG	Protein-export membrane protein secG	Protein-export membrane protein secG
e3j46n1	n:1-100	NC100	NC100	NC100
e3j46T1	T:1-100	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e3j46U1	U:1-103	SH3	SH3	SH3
e3j46y1	y:5-441	Preprotein translocase SecY subunit	Preprotein translocase SecY subunit	Preprotein translocase SecY subunit
e3j46Y1	Y:1-63	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)

Structural contacts of domain e3j46y1 of H-group "Preprotein translocase SecY subunit":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3j46n1	y:x,y,z->n:X,Y,Z	NC100	Interaction Interface Pymol
e3j46E1	y:x,y,z->E:X,Y,Z	Preprotein translocase SecE subunit	Interaction Interface Pymol
e3j46G1	y:x,y,z->G:X,Y,Z	Protein-export membrane protein secG	Interaction Interface Pymol
e3j46T1	y:x,y,z->T:X,Y,Z	Ribosomal proteins S24e, L23 and L15e	Interaction Interface Pymol
e3j46Y1	y:x,y,z->Y:X,Y,Z	Ribosomal protein L29 (L29p)	Interaction Interface Pymol
e3j46U1	y:x,y,z->U:X,Y,Z	SH3	Interaction Interface Pymol