Domain ID e3j5oW1

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  • A: a+b complex topology
  • X: alpha/beta-Hammerhead/Barrel-sandwich hybrid
  • H: alpha/beta-Hammerhead/Barrel-sandwich hybrid
  • T: Ribosomal L27 protein
  • F: Ribosomal_L27
UID: 001124411
Type: Automatic domain
Parent: e3j6bR1
Range: W:6-84
PDB: 3j5o
PDB Description:
Hsap BLAST neighbor: Q9P0M9
Species:

Structure of domain e3j5oW1

Domains in the same chain:

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e3j5oW1 W:6-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein

Domains in the same PDB:

e3j5o01 0:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e3j5o21 2:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e3j5o31 3:1-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e3j5o41 4:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e3j5o51 5:1-148 Alpha-beta plaits Ribosomal protein L10-like Ribosomal protein L10-like
e3j5o61 6:1-30 Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain Ribosomal protein L7/12, oligomerisation (N-terminal) domain
e3j5oC1 C:1-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e3j5oC2 C:125-271 SH3 SH3 SH3
e3j5oE1 E:1-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e3j5oF1 F:1-177 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e3j5oG2 G:1-81 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3j5oG1 G:82-176 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e3j5oH1 H:1-50 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e3j5oI2 I:1-71 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e3j5oI1 I:72-141 HTH HTH Ribosomal protein L11, C-terminal domain
e3j5oJ1 J:1-142 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e3j5oK1 K:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e3j5oN1 N:1-120 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e3j5oO1 O:2-117 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3j5oR1 R:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e3j5oS1 S:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e3j5oT1 T:1-93 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e3j5oU1 U:1-102 SH3 SH3 SH3
e3j5oV1 V:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e3j5oW1 W:6-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e3j5oX1 X:1-77 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e3j5oY1 Y:1-63 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e3j5oZ1 Z:1-58 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e

Structural contacts of domain e3j5oW1 of H-group "alpha/beta-Hammerhead/Barrel-sandwich hybrid":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3j5oO1 W:X,Y,Z->O:x,y,z Ribonuclease H-like Interaction Interface Pymol