ECOD: domain e3j5yB1

Domain ID e3j5yB1

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: GTP_EFTU

UID:	001393178
Type:	Automatic domain
Parent:	e2c78A3
Range:	B:207-433
PDB:	3j5y
PDB Description:	Eukaryotic peptide chain release factor GTP-binding subunit ERF3A
UniProt:	P15170
Hsap BLAST neighbor:	Q8IYD1
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e3j5yB1

Domains in the same chain:

Download Pymol

e3j5yB1	B:207-433	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3j5yB3	B:434-516	cradle loop barrel	RIFT-related	Alanine racemase-C
e3j5yB2	B:510-634	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain

Domains in the same PDB:

e3j5yA2	A:7-142	N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1	N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1	N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
e3j5yA3	A:143-276	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3j5yA1	A:277-420	Bacillus chorismate mutase-like	L30e-like	L30e-like
e3j5yB1	B:207-433	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3j5yB3	B:434-516	cradle loop barrel	RIFT-related	Alanine racemase-C
e3j5yB2	B:510-634	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain

Structural contacts of domain e3j5yB1 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3j5yA3	B:X,Y,Z->A:x,y,z	Ribonuclease H-like	Interaction Interface Pymol