Domain ID e3j6gD1

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: Tubulin nucleotide-binding domain-like
  • F: Tubulin
UID: 001294115
Type: Automatic domain
Parent: e2btoA2
Range: D:2-245
Ligands: GDP TA1
PDB: 3j6g
PDB Description: Tubulin beta chain
UniProt: P02554
Hsap BLAST neighbor: Q9BVA1
Species: Sus scrofa

Structure of domain e3j6gD1

Domains in the same chain:

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e3j6gD1 D:2-245 Rossmann-like Rossmann-related Tubulin nucleotide-binding domain-like
e3j6gD2 D:246-437 Bacillus chorismate mutase-like Tubulin C-terminal domain-like Tubulin C-terminal domain-like

Domains in the same PDB:

e3j6gA2 A:2-245 Rossmann-like Rossmann-related Tubulin nucleotide-binding domain-like
e3j6gA1 A:246-439 Bacillus chorismate mutase-like Tubulin C-terminal domain-like Tubulin C-terminal domain-like
e3j6gB1 B:2-245 Rossmann-like Rossmann-related Tubulin nucleotide-binding domain-like
e3j6gB2 B:246-437 Bacillus chorismate mutase-like Tubulin C-terminal domain-like Tubulin C-terminal domain-like
e3j6gC2 C:2-245 Rossmann-like Rossmann-related Tubulin nucleotide-binding domain-like
e3j6gC1 C:246-439 Bacillus chorismate mutase-like Tubulin C-terminal domain-like Tubulin C-terminal domain-like
e3j6gD1 D:2-245 Rossmann-like Rossmann-related Tubulin nucleotide-binding domain-like
e3j6gD2 D:246-437 Bacillus chorismate mutase-like Tubulin C-terminal domain-like Tubulin C-terminal domain-like
e3j6gE2 E:2-245 Rossmann-like Rossmann-related Tubulin nucleotide-binding domain-like
e3j6gE1 E:246-439 Bacillus chorismate mutase-like Tubulin C-terminal domain-like Tubulin C-terminal domain-like
e3j6gF1 F:2-245 Rossmann-like Rossmann-related Tubulin nucleotide-binding domain-like
e3j6gF2 F:246-437 Bacillus chorismate mutase-like Tubulin C-terminal domain-like Tubulin C-terminal domain-like
e3j6gG2 G:2-245 Rossmann-like Rossmann-related Tubulin nucleotide-binding domain-like
e3j6gG1 G:246-439 Bacillus chorismate mutase-like Tubulin C-terminal domain-like Tubulin C-terminal domain-like
e3j6gH1 H:2-245 Rossmann-like Rossmann-related Tubulin nucleotide-binding domain-like
e3j6gH2 H:246-437 Bacillus chorismate mutase-like Tubulin C-terminal domain-like Tubulin C-terminal domain-like
e3j6gI2 I:2-245 Rossmann-like Rossmann-related Tubulin nucleotide-binding domain-like
e3j6gI1 I:246-439 Bacillus chorismate mutase-like Tubulin C-terminal domain-like Tubulin C-terminal domain-like
e3j6gJ1 J:2-245 Rossmann-like Rossmann-related Tubulin nucleotide-binding domain-like
e3j6gJ2 J:246-437 Bacillus chorismate mutase-like Tubulin C-terminal domain-like Tubulin C-terminal domain-like
e3j6gK2 K:2-245 Rossmann-like Rossmann-related Tubulin nucleotide-binding domain-like
e3j6gK1 K:246-439 Bacillus chorismate mutase-like Tubulin C-terminal domain-like Tubulin C-terminal domain-like
e3j6gL1 L:2-245 Rossmann-like Rossmann-related Tubulin nucleotide-binding domain-like
e3j6gL2 L:246-437 Bacillus chorismate mutase-like Tubulin C-terminal domain-like Tubulin C-terminal domain-like
e3j6gM2 M:2-245 Rossmann-like Rossmann-related Tubulin nucleotide-binding domain-like
e3j6gM1 M:246-439 Bacillus chorismate mutase-like Tubulin C-terminal domain-like Tubulin C-terminal domain-like
e3j6gN1 N:2-245 Rossmann-like Rossmann-related Tubulin nucleotide-binding domain-like
e3j6gN2 N:246-437 Bacillus chorismate mutase-like Tubulin C-terminal domain-like Tubulin C-terminal domain-like
e3j6gO2 O:2-245 Rossmann-like Rossmann-related Tubulin nucleotide-binding domain-like
e3j6gO1 O:246-439 Bacillus chorismate mutase-like Tubulin C-terminal domain-like Tubulin C-terminal domain-like
e3j6gP1 P:2-245 Rossmann-like Rossmann-related Tubulin nucleotide-binding domain-like
e3j6gP2 P:246-437 Bacillus chorismate mutase-like Tubulin C-terminal domain-like Tubulin C-terminal domain-like
e3j6gQ2 Q:2-245 Rossmann-like Rossmann-related Tubulin nucleotide-binding domain-like
e3j6gQ1 Q:246-439 Bacillus chorismate mutase-like Tubulin C-terminal domain-like Tubulin C-terminal domain-like
e3j6gR1 R:2-245 Rossmann-like Rossmann-related Tubulin nucleotide-binding domain-like
e3j6gR2 R:246-437 Bacillus chorismate mutase-like Tubulin C-terminal domain-like Tubulin C-terminal domain-like

Structural contacts of domain e3j6gD1 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3j6gC2 D:X,Y,Z->C:x,y,z Rossmann-related Interaction Interface Pymol
e3j6gG1 D:X,Y,Z->G:x,y,z Tubulin C-terminal domain-like Interaction Interface Pymol
e3j6gG2 D:X,Y,Z->G:x,y,z Rossmann-related Interaction Interface Pymol