Domain ID e3jb9F1

Download files:
  • A: beta barrels
  • X: SH3
  • H: SH3
  • T: SH3
  • F: LSM
UID: 001687186
Type: Automatic domain
Parent: e1b34A1
Range: F:1-82
PDB: 3jb9
PDB Description: Small nuclear ribonucleoprotein Sm D1
UniProt: O42661
Hsap BLAST neighbor: P62314
Species:

Structure of domain e3jb9F1

Domains in the same chain:

Download Pymol

e3jb9F1 F:1-82 SH3 SH3 SH3

Domains in the same PDB:

e3jb9a2 a:18-87 RING/U-box-like RING/U-box-like FYVE/PHD zinc finger
e3jb9a1 a:170-184,a:224-284 Alpha-beta plaits RNA-binding domain, RBD RNA-binding domain, RBD
e3jb9A1 A:47-834 Pre-mRNA-splicing factor 8 N-terminal domain Pre-mRNA-splicing factor 8 N-terminal domain Pre-mRNA-splicing factor 8 N-terminal domain
e3jb9A2 A:835-1207 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3jb9A3 A:1208-1526 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3jb9A4 A:1527-1780 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e3jb9A5 A:1781-2030 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3jb9b1 b:2-87 SH3 SH3 SH3
e3jb9B3 B:140-451 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3jb9B1 B:452-594 cradle loop barrel RIFT-related Alanine racemase-C
e3jb9B2 B:595-673 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e3jb9B4 B:674-842 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e3jb9B5 B:843-971 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e3jb9c1 c:408-633 HIT-like HIT-related HIT-related
e3jb9d1 d:1-155 Cyclophilin-like Cyclophilin-like Cyclophilin-like
e3jb9D1 D:2-97 SH3 SH3 SH3
e3jb9e1 e:3-146 Pre-mRNA-splicing factor BUD31 Pre-mRNA-splicing factor BUD31 Pre-mRNA-splicing factor BUD31
e3jb9E1 E:2-87 SH3 SH3 SH3
e3jb9f1 f:1-82 SH3 SH3 SH3
e3jb9F1 F:1-82 SH3 SH3 SH3
e3jb9G1 G:19-115 SH3 SH3 SH3
e3jb9H1 H:9-84 SH3 SH3 SH3
e3jb9I1 I:4-78 SH3 SH3 SH3
e3jb9j1 j:1-162 Single-stranded right-handed beta-helix Leucine-rich repeats Leucine-rich repeats
e3jb9J1 J:3-75 SH3 SH3 SH3
e3jb9k1 k:5-93 Alpha-beta plaits RNA-binding domain, RBD RNA-binding domain, RBD
e3jb9K1 K:154-470 beta-propeller-like beta-propeller 8-bladed
e3jb9l1 l:19-115 SH3 SH3 SH3
e3jb9L1 L:42-340 beta-propeller-like beta-propeller 7-bladed
e3jb9m1 m:9-84 SH3 SH3 SH3
e3jb9n1 n:4-78 SH3 SH3 SH3
e3jb9o1 o:3-75 SH3 SH3 SH3
e3jb9r1 r:477-737 Repetitive alpha hairpins ARM repeat ARM repeat
e3jb9R1 R:13-28,R:30-327 Repetitive alpha hairpins ARM repeat ARM repeat
e3jb9S1 S:1-51 RING/U-box-like RING/U-box-like RING/U-box
e3jb9T1 T:1-51 RING/U-box-like RING/U-box-like RING/U-box
e3jb9U1 U:1-51 RING/U-box-like RING/U-box-like RING/U-box
e3jb9U2 U:173-488 beta-propeller-like beta-propeller 8-bladed
e3jb9V1 V:1-51 RING/U-box-like RING/U-box-like RING/U-box
e3jb9W1 W:8-62 HTH HTH tri-helical
e3jb9W2 W:58-109,W:154-178 HTH HTH tri-helical
e3jb9X3 X:7-383 Repetitive alpha hairpins ARM repeat ARM repeat
e3jb9X4 X:464-614 cradle loop barrel RIFT-related Alanine racemase-C
e3jb9X1 X:668-1044 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3jb9X2 X:1045-1284 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3jb9Y1 Y:49-167 CCCH zinc finger CCCH zinc finger CCCH zinc finger
e3jb9Y2 Y:168-235 Alpha-beta plaits RNA-binding domain, RBD RNA-binding domain, RBD
e3jb9Z1 Z:2-81 SH3 SH3 SH3