Domain ID e3jv2B8

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: SecA_DEAD
UID: 001233837
Type: Automatic domain
Parent: e1tf5A3
Range: B:14-223,B:349-395
Ligands: ADP MG
PDB: 3jv2
PDB Description: PROTEIN TRANSLOCASE SUBUNIT SECA
UniProt: P28366
Species: Bacillus subtilis

Structure of domain e3jv2B8

Domains in the same chain:

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e3jv2B8 B:14-223,B:349-395 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3jv2B7 B:224-348 Pre-protein crosslinking domain of SecA Pre-protein crosslinking domain of SecA Pre-protein crosslinking domain of SecA
e3jv2B6 B:396-570 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3jv2B5 B:571-779 Helical scaffold and wing domains of SecA Helical scaffold and wing domains of SecA Helical scaffold and wing domains of SecA

Domains in the same PDB:

e3jv2A8 A:15-223,A:349-395 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3jv2A7 A:224-348 Pre-protein crosslinking domain of SecA Pre-protein crosslinking domain of SecA Pre-protein crosslinking domain of SecA
e3jv2A6 A:396-570 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3jv2A5 A:571-779 Helical scaffold and wing domains of SecA Helical scaffold and wing domains of SecA Helical scaffold and wing domains of SecA
e3jv2B8 B:14-223,B:349-395 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3jv2B7 B:224-348 Pre-protein crosslinking domain of SecA Pre-protein crosslinking domain of SecA Pre-protein crosslinking domain of SecA
e3jv2B6 B:396-570 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e3jv2B5 B:571-779 Helical scaffold and wing domains of SecA Helical scaffold and wing domains of SecA Helical scaffold and wing domains of SecA

Structural contacts of domain e3jv2B8 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3jv2A5 B:x,y,z->A:X,Y,Z Helical scaffold and wing domains of SecA Interaction Interface Pymol
e3jv2B8 B:x,y,z->B:-Y,X-1,Z+1/4 P-loop domains-related Interaction Interface Pymol
e3jv2B6 B:x,y,z->B:-Y,X-1,Z+1/4 P-loop domains-related Interaction Interface Pymol
e3jv2B8 B:-Y,X-1,Z+1/4->B:x,y,z P-loop domains-related Interaction Interface Pymol
e3jv2B5 B:-Y,X-1,Z+1/4->B:x,y,z Helical scaffold and wing domains of SecA Interaction Interface Pymol