Domain ID e3jwdB2

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  • A: a+b two layers
  • X: Ribosomal protein L31e-like
  • H: Ribosomal protein L31e/gp120 outer domain
  • T: Ribosomal protein L31e/gp120 outer domain
  • F: GP120
UID: 001829569
Type: Automatic domain
Parent: e4rfnG1
Range: B:256-473
Ligands: GOL NAG
PDB: 3jwd
PDB Description: HIV-1 GP120 ENVELOPE GLYCOPROTEIN
Species: Human immunodeficiency virus 1

Structure of domain e3jwdB2

Domains in the same chain:

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e3jwdB1 B:31-255,B:474-499 gp120 inner domain gp120 inner domain gp120 inner domain
e3jwdB2 B:256-473 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain

Domains in the same PDB:

e3jwdA1 A:31-255,A:474-501 gp120 inner domain gp120 inner domain gp120 inner domain
e3jwdA2 A:256-473 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e3jwdB1 B:31-255,B:474-499 gp120 inner domain gp120 inner domain gp120 inner domain
e3jwdB2 B:256-473 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e3jwdC1 C:1000-1097 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3jwdC2 C:1098-1183 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3jwdD1 D:1001-1097 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3jwdD2 D:1098-1183 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3jwdH1 H:1-113 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3jwdH2 H:114-214 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3jwdL1 L:1-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3jwdL2 L:108-214 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3jwdO1 O:1-107 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3jwdO2 O:108-213 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3jwdP1 P:1-113 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3jwdP2 P:114-213 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e3jwdB2 of H-group "Ribosomal protein L31e/gp120 outer domain":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3jwdD1 B:x,y,z->D:X,Y,Z Immunoglobulin-related Interaction Interface Pymol