Domain ID e3jxeB1

Download files:
  • A: a/b three-layered sandwiches
  • X: HUP domain-like
  • H: HUP domains
  • T: HUP domains
  • F: tRNA-synt_1b
UID: 000376964
Type: Automatic domain
Parent: e1j1uA1
Range: B:1-381
Ligands: SO4 TYM
PDB: 3jxe
PDB Description: Tryptophanyl-tRNA synthetase
UniProt: O59584
Hsap BLAST neighbor: P23381
Species: Pyrococcus horikoshii

Structure of domain e3jxeB1

Domains in the same chain:

e3jxeB1 B:1-381 HUP domain-like HUP domains HUP domains

Domains in the same PDB:

e3jxeA2 A:1-280,A:301-381 HUP domain-like HUP domains HUP domains
e3jxeB1 B:1-381 HUP domain-like HUP domains HUP domains

Structural contacts of domain e3jxeB1 of H-group "HUP domains":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3jxeA2 B:x,y,z->A:X,Y,Z HUP domains Interaction Interface Pymol
e3jxeA2 B:x,y,z->A:-Z,X+1/2,-Y+1/2 HUP domains Interaction Interface Pymol
e3jxeA2 B:x,y,z->A:Z,X,Y HUP domains Interaction Interface Pymol
e3jxeB1 B:x,y,z->B:Z,X,Y HUP domains Interaction Interface Pymol
e3jxeB1 B:Z,X,Y->B:x,y,z HUP domains Interaction Interface Pymol