ECOD: domain e3k0sA4

Domain ID e3k0sA4

A: mixed a+b and a/b
X: Ribonuclease H-like
H: Ribonuclease H-like
T: Ribonuclease H-like
F: MutS_II

UID:	000954544
Type:	Automatic domain
Parent:	e1ewqA4
Range:	A:117-269
PDB:	3k0s
PDB Description:	DNA mismatch repair protein mutS
UniProt:	P23909
Species:

Domain
In chain context
In PDB context

Structure of domain e3k0sA4

Domains in the same chain:

Download Pymol

e3k0sA2	A:2-116	Homing endonucleases-like	DNA repair protein MutS, domain I	DNA repair protein MutS, domain I
e3k0sA4	A:117-269	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3k0sA1	A:270-566	Four-helical up-and-down bundle	DNA repair protein MutS, domain III	DNA repair protein MutS, domain III
e3k0sA3	A:567-788	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e3k0sA2	A:2-116	Homing endonucleases-like	DNA repair protein MutS, domain I	DNA repair protein MutS, domain I
e3k0sA4	A:117-269	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3k0sA1	A:270-566	Four-helical up-and-down bundle	DNA repair protein MutS, domain III	DNA repair protein MutS, domain III
e3k0sA3	A:567-788	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e3k0sB4	B:18-116	Homing endonucleases-like	DNA repair protein MutS, domain I	DNA repair protein MutS, domain I
e3k0sB3	B:117-269	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e3k0sB1	B:270-566	Four-helical up-and-down bundle	DNA repair protein MutS, domain III	DNA repair protein MutS, domain III
e3k0sB2	B:567-800	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e3k0sA4 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3k0sB2	A:x,y,z->B:X-1/2,-Y+1/2,-Z	P-loop domains-related	Interaction Interface Pymol
e3k0sB1	A:x,y,z->B:X-1/2,-Y+1/2,-Z	DNA repair protein MutS, domain III	Interaction Interface Pymol
e3k0sA3	A:X-1/2,-Y+1/2,-Z->A:x,y,z	P-loop domains-related	Interaction Interface Pymol