ECOD: domain e3k1rB1

Domain ID e3k1rB1

A: alpha arrays
X: HhH/H2TH
H: SAM/DNA-glycosylase
T: SAM domain-like
F: SAM_1

UID:	000137917
Type:	Automatic domain
Parent:	e1oxjA1
Range:	B:388-461
PDB:	3k1r
PDB Description:	Usher syndrome type-1G protein
UniProt:	Q495M9
Hsap BLAST neighbor:	Q495M9
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e3k1rB1	B:388-461	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like

Domains in the same PDB:

e3k1rA2	A:1-78	PAH2 domain	PAH2 domain	PAH2 domain
e3k1rA1	A:79-192	PDZ domain	PDZ domain	PDZ domain
e3k1rB1	B:388-461	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like

Structural contacts of domain e3k1rB1 of H-group "SAM/DNA-glycosylase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3k1rA1	B:x,y,z->A:X,Y,Z	PDZ domain	Interaction Interface Pymol
e3k1rA2	B:-X+1,Y-1/2,-Z->A:x,y,z	PAH2 domain	Interaction Interface Pymol
e3k1rA1	B:-X,Y-1/2,-Z->A:x,y,z	PDZ domain	Interaction Interface Pymol