Domain ID e3k85A1

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  • A: a+b two layers
  • X: Ribosomal protein S5 domain 2-like
  • H: Ribosomal protein S5 domain 2-like
  • T: Ribosomal protein S5 domain 2-like
  • F: GHMP_kinases_N
UID: 001202336
Type: Automatic domain
Parent: e1kkhA2
Range: A:2-189
PDB: 3k85
PDB Description: D-glycero-D-manno-heptose 1-phosphate kinase
UniProt: Q8AAJ0
Species: Bacteroides thetaiotaomicron

Structure of domain e3k85A1

Structural contacts of domain e3k85A1 of H-group "Ribosomal protein S5 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3k85A1 A:x,y,z->A:-X,Y,-Z+3/2 Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e3k85A2 A:x,y,z->A:-X,Y,-Z+3/2 GHMP Kinase, C-terminal domain Interaction Interface Pymol
e3k85A2 A:-X,Y,-Z+3/2->A:x,y,z GHMP Kinase, C-terminal domain Interaction Interface Pymol
e3k85A1 A:-X,Y,-Z+3/2->A:x,y,z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e3k85B3 A:X,Y,Z->B:x,y,z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e3k85B4 A:X,Y,Z->B:x,y,z GHMP Kinase, C-terminal domain Interaction Interface Pymol
e3k85A2 A:x,y,z->A:X-1/2,-Y+1/2,-Z+1 GHMP Kinase, C-terminal domain Interaction Interface Pymol
e3k85A1 A:x,y,z->A:X-1/2,-Y+1/2,-Z+1 Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e3k85A1 A:X-1/2,-Y+1/2,-Z+1->A:x,y,z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e3k85B4 A:-X,Y,-Z+3/2->B:x,y,z GHMP Kinase, C-terminal domain Interaction Interface Pymol
e3k85B3 A:-X,Y,-Z+3/2->B:x,y,z Ribosomal protein S5 domain 2-like Interaction Interface Pymol