ECOD: domain e3kasB1

Domain ID e3kasB1

A: a+b complex topology
X: Envelope glycoprotein GP1
H: Envelope glycoprotein GP1
T: Envelope glycoprotein GP1
F: Unmapped domains

UID:	000119427
Type:	Manual and representative domain
Range:	B:86-241
Ligands:	NAG PO4
PDB:	3kas
PDB Description:	GLYCOPROTEIN
UniProt:	Q8AZ57
Species:	Machupo virus

Domains in the same chain:

Download Pymol

e3kasB1	B:86-241	Envelope glycoprotein GP1	Envelope glycoprotein GP1	Envelope glycoprotein GP1

Domains in the same PDB:

e3kasA2	A:121-189,A:383-608	Phosphorylase/hydrolase-like	Zn-dependent exopeptidases	Zn-dependent exopeptidases
e3kasA3	A:190-382	The "swivelling" beta/beta/alpha domains	The "swivelling" beta/beta/alpha domain	The "swivelling" beta/beta/alpha domain
e3kasA1	A:609-756	N-cbl like	Transferrin receptor ectodomain, C-terminal domain	Transferrin receptor ectodomain, C-terminal domain
e3kasB1	B:86-241	Envelope glycoprotein GP1	Envelope glycoprotein GP1	Envelope glycoprotein GP1

Structural contacts of domain e3kasB1 of H-group "Envelope glycoprotein GP1":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e3kasA3	B:x,y,z->A:X,Y,Z	The "swivelling" beta/beta/alpha domain	Interaction Interface Pymol
e3kasB1	B:x,y,z->B:-X-1,Y,-Z+1/2	Envelope glycoprotein GP1	Interaction Interface Pymol
e3kasB1	B:-X-1,Y,-Z+1/2->B:x,y,z	Envelope glycoprotein GP1	Interaction Interface Pymol
e3kasA2	B:-X-1/2,Y-1/2,-Z+1/2->A:x,y,z	Zn-dependent exopeptidases	Interaction Interface Pymol
e3kasA1	B:-X-1/2,Y-1/2,-Z+1/2->A:x,y,z	Transferrin receptor ectodomain, C-terminal domain	Interaction Interface Pymol
e3kasA1	B:x,y,z->A:X-1/2,-Y+1/2,-Z	Transferrin receptor ectodomain, C-terminal domain	Interaction Interface Pymol
e3kasA2	B:-X-1/2,-Y+1/2,Z-1/2->A:x,y,z	Zn-dependent exopeptidases	Interaction Interface Pymol