| UID: | 001174911 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1kskA2 |
| Range: | A:34-110 |
| PDB: | 3kbg |
| PDB Description: | 30S ribosomal protein S4e |
| UniProt: | Q56230 |
| Species: | Thermoplasma acidophilum |
Structure of domain e3kbgA8
Domains in the same chain:
| e3kbgA8 | A:34-110 | beta-Grasp | Ubiquitin-related | Alpha-L RNA-binding motif |
| e3kbgA7 | A:111-169 | OB-fold | Nucleic acid-binding proteins | Nucleic acid-binding proteins |
| e3kbgA9 | A:170-227 | SH3 | SH3 | SH3 |
Domains in the same PDB:
| e3kbgA8 | A:34-110 | beta-Grasp | Ubiquitin-related | Alpha-L RNA-binding motif |
| e3kbgA7 | A:111-169 | OB-fold | Nucleic acid-binding proteins | Nucleic acid-binding proteins |
| e3kbgA9 | A:170-227 | SH3 | SH3 | SH3 |
Structural contacts of domain e3kbgA8 of H-group "Ubiquitin-related":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3kbgA7 | A:x,y,z->A:Y,X,-Z | Nucleic acid-binding proteins | Interaction Interface Pymol |
| e3kbgA7 | A:Y,X,-Z->A:x,y,z | Nucleic acid-binding proteins | Interaction Interface Pymol |
| e3kbgA8 | A:x,y,z->A:-Y+1,X-Y,Z-1/3 | Ubiquitin-related | Interaction Interface Pymol |
| e3kbgA8 | A:-Y+1,X-Y,Z-1/3->A:x,y,z | Ubiquitin-related | Interaction Interface Pymol |
| e3kbgA7 | A:X-Y,-Y+1,-Z+1/3->A:x,y,z | Nucleic acid-binding proteins | Interaction Interface Pymol |
