Domain ID e3kd1E8

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  • A: alpha bundles
  • X: "thumb" domain in bacteriophage RB69-like DNA polymerase I
  • H: "thumb" domain in bacteriophage RB69-like DNA polymerase I
  • T: "thumb" domain in bacteriophage RB69-like DNA polymerase I
  • F: Unmapped domains
UID: 001206542
Type: Automatic domain
Parent: e1ih7A2
Range: E:733-905
PDB: 3kd1
PDB Description: DNA polymerase
UniProt: Q38087
Species: Enterobacteria phage RB69

Structure of domain e3kd1E8

Structural contacts of domain e3kd1E8 of H-group ""thumb" domain in bacteriophage RB69-like DNA polymerase I":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3kd1E4 E:x,y,z->E:-X,Y-1/2,-Z+1/2 Ribonuclease H-like Interaction Interface Pymol
e3kd1E10 E:x,y,z->E:X-1/2,-Y+1/2,-Z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3kd1E4 E:x,y,z->E:X-1,Y,Z Ribonuclease H-like Interaction Interface Pymol
e3kd1E4 E:x,y,z->E:X-1/2,-Y+1/2,-Z+1 Ribonuclease H-like Interaction Interface Pymol