| UID: | 000380466 |
|---|---|
| Type: | Automatic domain |
| Parent: | e3kdrA1 |
| Range: | C:43-113,C:167-336 |
| Ligands: | SO4 |
| PDB: | 3kdr |
| PDB Description: | HK97 Family Phage Portal Protein |
| UniProt: | Q6NFR1 |
| Species: | Corynebacterium diphtheriae |
Structure of domain e3kdrC2
Domains in the same chain:
Domains in the same PDB:
Structural contacts of domain e3kdrC2 of H-group "Alpha-helical domain in upper collar protein":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3kdrB2 | C:-Y,X,Z->B:x,y,z | Alpha-helical domain in upper collar protein | Interaction Interface Pymol |
| e3kdrB1 | C:-Y,X,Z->B:x,y,z | Barrel domain in upper collar protein | Interaction Interface Pymol |
| e3kdrA1 | C:x,y,z->A:X,Y,Z | Alpha-helical domain in upper collar protein | Interaction Interface Pymol |
| e3kdrC1 | C:x,y,z->C:Z,-Y,X | Barrel domain in upper collar protein | Interaction Interface Pymol |
| e3kdrC2 | C:x,y,z->C:Z,-Y,X | Alpha-helical domain in upper collar protein | Interaction Interface Pymol |
| e3kdrC2 | C:Z,-Y,X->C:x,y,z | Alpha-helical domain in upper collar protein | Interaction Interface Pymol |
| e3kdrC1 | C:Z,-Y,X->C:x,y,z | Barrel domain in upper collar protein | Interaction Interface Pymol |
| e3kdrA1 | C:x,y,z->A:-Z+1/2,-Y,-X+1/2 | Alpha-helical domain in upper collar protein | Interaction Interface Pymol |
| e3kdrB2 | C:x,y,z->B:-Z+1/2,-Y,-X+1/2 | Alpha-helical domain in upper collar protein | Interaction Interface Pymol |
