Domain ID e3kemB3

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  • A: a/b three-layered sandwiches
  • X: NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase
  • H: NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase
  • T: NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase
  • F: LYTB
UID: 001036388
Type: Automatic domain
Parent: e3dnfA1
Range: B:196-310
Ligands: F3S IPE
PDB: 3kem
PDB Description: 4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE
UniProt: P62623
Species:

Structure of domain e3kemB3

Domains in the same chain:

Download Pymol

e3kemB1 B:1-95 NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase
e3kemB2 B:96-195 NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase
e3kemB3 B:196-310 NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase

Domains in the same PDB:

e3kemA1 A:1-95 NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase
e3kemA2 A:96-195 NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase
e3kemA3 A:196-309 NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase
e3kemB1 B:1-95 NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase
e3kemB2 B:96-195 NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase
e3kemB3 B:196-310 NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase

Structural contacts of domain e3kemB3 of H-group "NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3kemB1 B:x,y,z->B:-X+1,Y,-Z+2 NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase Interaction Interface Pymol
e3kemB2 B:x,y,z->B:-X+1,Y,-Z+2 NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase Interaction Interface Pymol
e3kemB3 B:x,y,z->B:-X+1,Y,-Z+2 NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase Interaction Interface Pymol
e3kemB1 B:-X+1,Y,-Z+2->B:x,y,z NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase Interaction Interface Pymol
e3kemB2 B:-X+1,Y,-Z+2->B:x,y,z NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase Interaction Interface Pymol
e3kemB3 B:-X+1,Y,-Z+2->B:x,y,z NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase Interaction Interface Pymol
e3kemA3 B:x,y,z->A:-X+1/2,Y-1/2,-Z+1 NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase Interaction Interface Pymol
e3kemA1 B:x,y,z->A:-X+1/2,Y-1/2,-Z+1 NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase Interaction Interface Pymol
e3kemA2 B:-X+1/2,Y-1/2,-Z+1->A:x,y,z NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase Interaction Interface Pymol
e3kemA2 B:x,y,z->A:X,Y,Z NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase Interaction Interface Pymol
e3kemA1 B:x,y,z->A:X,Y,Z NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase Interaction Interface Pymol