Domain ID e3kfeD4

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  • A: a/b three-layered sandwiches
  • X: The "swivelling" beta/beta/alpha domains
  • H: The "swivelling" beta/beta/alpha domain
  • T: The "swivelling" beta/beta/alpha domain
  • F: Cpn60_TCP1
UID: 001257420
Type: Automatic domain
Parent: e3aq1B3
Range: D:204-349
PDB: 3kfe
PDB Description: Chaperonin
UniProt: Q877G8
Hsap BLAST neighbor: P48643
Species: Methanococcus maripaludis

Structure of domain e3kfeD4

Domains in the same chain:

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e3kfeD5 D:11-143,D:385-519 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e3kfeD6 D:144-203,D:350-384 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e3kfeD4 D:204-349 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain

Domains in the same PDB:

e3kfeA5 A:11-143,A:385-519 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e3kfeA6 A:144-203,A:350-384 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e3kfeA4 A:204-349 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e3kfeB5 B:11-143,B:385-519 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e3kfeB6 B:144-203,B:350-384 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e3kfeB4 B:204-349 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e3kfeC5 C:11-143,C:385-519 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e3kfeC6 C:144-203,C:350-384 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e3kfeC4 C:204-349 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e3kfeD5 D:11-143,D:385-519 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e3kfeD6 D:144-203,D:350-384 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e3kfeD4 D:204-349 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e3kfeE5 E:11-143,E:385-519 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e3kfeE6 E:144-203,E:350-384 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e3kfeE4 E:204-349 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e3kfeF5 F:11-143,F:385-519 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e3kfeF6 F:144-203,F:350-384 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e3kfeF4 F:204-349 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e3kfeG5 G:11-143,G:385-519 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e3kfeG6 G:144-203,G:350-384 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e3kfeG4 G:204-349 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e3kfeH5 H:11-143,H:385-519 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e3kfeH6 H:144-203,H:350-384 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e3kfeH4 H:204-349 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain

Structural contacts of domain e3kfeD4 of H-group "The "swivelling" beta/beta/alpha domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3kfeC4 D:x,y,z->C:X,Y,Z The "swivelling" beta/beta/alpha domain Interaction Interface Pymol
e3kfeE6 D:X,Y,Z->E:x,y,z GroEL-intermediate domain like Interaction Interface Pymol
e3kfeE4 D:X,Y,Z->E:x,y,z The "swivelling" beta/beta/alpha domain Interaction Interface Pymol
e3kfeE5 D:X,Y,Z->E:x,y,z GroEL equatorial domain-like Interaction Interface Pymol
e3kfeC4 D:x,y,z->C:-X,Y,-Z The "swivelling" beta/beta/alpha domain Interaction Interface Pymol
e3kfeD4 D:x,y,z->D:-X,Y,-Z The "swivelling" beta/beta/alpha domain Interaction Interface Pymol
e3kfeD4 D:-X,Y,-Z->D:x,y,z The "swivelling" beta/beta/alpha domain Interaction Interface Pymol