Domain ID e3kfkD5

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  • A: alpha bundles
  • X: GroEL equatorial domain-like
  • H: GroEL equatorial domain-like
  • T: GroEL equatorial domain-like
  • F: Cpn60_TCP1
UID: 001257469
Type: Automatic domain
Parent: e1kp8A1
Range: D:11-143,D:385-519
Ligands: AGS
PDB: 3kfk
PDB Description: CHAPERONIN
UniProt: Q877G8
Hsap BLAST neighbor: P49368
Species: Methanococcus maripaludis

Structure of domain e3kfkD5

Domains in the same chain:

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e3kfkD5 D:11-143,D:385-519 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e3kfkD6 D:144-203,D:350-384 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e3kfkD4 D:204-349 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain

Domains in the same PDB:

e3kfkA5 A:11-143,A:385-519 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e3kfkA6 A:144-203,A:350-384 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e3kfkA4 A:204-349 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e3kfkB5 B:11-143,B:385-519 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e3kfkB6 B:144-203,B:350-384 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e3kfkB4 B:204-349 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e3kfkC5 C:11-143,C:385-519 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e3kfkC6 C:144-203,C:350-384 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e3kfkC4 C:204-349 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain
e3kfkD5 D:11-143,D:385-519 GroEL equatorial domain-like GroEL equatorial domain-like GroEL equatorial domain-like
e3kfkD6 D:144-203,D:350-384 Zincin-like GroEL-intermediate domain like GroEL-intermediate domain like
e3kfkD4 D:204-349 The "swivelling" beta/beta/alpha domains The "swivelling" beta/beta/alpha domain The "swivelling" beta/beta/alpha domain

Structural contacts of domain e3kfkD5 of H-group "GroEL equatorial domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3kfkA5 D:x,y,z->A:-X,-Y-1,Z GroEL equatorial domain-like Interaction Interface Pymol
e3kfkC5 D:x,y,z->C:X,Y,Z GroEL equatorial domain-like Interaction Interface Pymol
e3kfkD5 D:x,y,z->D:X,-Y-1,-Z GroEL equatorial domain-like Interaction Interface Pymol
e3kfkD5 D:X,-Y-1,-Z->D:x,y,z GroEL equatorial domain-like Interaction Interface Pymol
e3kfkD5 D:x,y,z->D:-X+1,-Y-1,Z GroEL equatorial domain-like Interaction Interface Pymol
e3kfkD5 D:-X+1,-Y-1,Z->D:x,y,z GroEL equatorial domain-like Interaction Interface Pymol