Domain ID e3khuB1

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: NAD(P)-binding Rossmann-fold domains
  • F: UDPG_MGDP_dh_N
UID: 001650123
Type: Automatic domain
Parent: e1mv8A2
Range: B:0-215
Ligands: EDO UPG
PDB: 3khu
PDB Description: UDP-glucose 6-dehydrogenase
UniProt: O60701
Hsap BLAST neighbor: O60701
Species: Homo sapiens

Structure of domain e3khuB1

Domains in the same chain:

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e3khuB1 B:0-215 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3khuB2 B:216-325 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e3khuB3 B:326-466 Rossmann-like Rossmann-related UDPG/MGDP dehydrogenase C-terminal domain

Domains in the same PDB:

e3khuA1 A:0-215 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3khuA2 A:216-325 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e3khuA3 A:326-466 Rossmann-like Rossmann-related UDPG/MGDP dehydrogenase C-terminal domain
e3khuB1 B:0-215 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3khuB2 B:216-325 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e3khuB3 B:326-466 Rossmann-like Rossmann-related UDPG/MGDP dehydrogenase C-terminal domain
e3khuC1 C:0-215 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3khuC2 C:216-325 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e3khuC3 C:326-466 Rossmann-like Rossmann-related UDPG/MGDP dehydrogenase C-terminal domain
e3khuD1 D:0-215 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3khuD2 D:216-325 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e3khuD3 D:326-466 Rossmann-like Rossmann-related UDPG/MGDP dehydrogenase C-terminal domain
e3khuE3 E:1-212 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3khuE2 E:213-318 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e3khuE1 E:319-466 Rossmann-like Rossmann-related UDPG/MGDP dehydrogenase C-terminal domain
e3khuF1 F:0-215 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e3khuF2 F:216-325 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like 6-phosphogluconate dehydrogenase C-terminal domain-like
e3khuF3 F:326-466 Rossmann-like Rossmann-related UDPG/MGDP dehydrogenase C-terminal domain

Structural contacts of domain e3khuB1 of H-group "Rossmann-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3khuA2 B:x,y,z->A:X,Y,Z 6-phosphogluconate dehydrogenase C-terminal domain-like Interaction Interface Pymol
e3khuD2 B:X,Y,Z->D:x,y,z 6-phosphogluconate dehydrogenase C-terminal domain-like Interaction Interface Pymol
e3khuD3 B:X,Y,Z->D:x,y,z Rossmann-related Interaction Interface Pymol
e3khuE3 B:-X-1/2,Y-1/2,-Z->E:x,y,z Rossmann-related Interaction Interface Pymol