Domain ID e3kk2B3

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  • A: mixed a+b and a/b
  • X: Ribonuclease H-like
  • H: RNaseH-like domain in reverse transcriptase
  • T: RNaseH-like domain in reverse transcriptase
  • F: RVT_connect
UID: 000387109
Type: Automatic domain
Parent: e2zd1B3
Range: B:302-430
PDB: 3kk2
PDB Description: Reverse transcriptase p51 subunit
UniProt: P04585
Species:

Structure of domain e3kk2B3

Domains in the same chain:

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e3kk2B2 B:4-216 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3kk2B1 B:230-301 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3kk2B3 B:302-430 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase

Domains in the same PDB:

e3kk2A8 A:1-242 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3kk2A7 A:243-316 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3kk2A5 A:317-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase
e3kk2A6 A:429-555 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3kk2B2 B:4-216 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3kk2B1 B:230-301 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3kk2B3 B:302-430 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase

Structural contacts of domain e3kk2B3 of H-group "RNaseH-like domain in reverse transcriptase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3kk2A5 B:x,y,z->A:X,Y,Z RNaseH-like domain in reverse transcriptase Interaction Interface Pymol
e3kk2A6 B:x,y,z->A:X,Y,Z Ribonuclease H-like Interaction Interface Pymol
e3kk2A7 B:-X+1/2,-Y+1/2,Z-1/2->A:x,y,z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e3kk2B3 B:x,y,z->B:-X+1,Y,-Z+1/2 RNaseH-like domain in reverse transcriptase Interaction Interface Pymol
e3kk2B1 B:x,y,z->B:-X+1,Y,-Z+1/2 helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e3kk2B3 B:-X+1,Y,-Z+1/2->B:x,y,z RNaseH-like domain in reverse transcriptase Interaction Interface Pymol
e3kk2B1 B:-X+1,Y,-Z+1/2->B:x,y,z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol