Domain ID e3klfI8

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: Adenylyl and guanylyl cyclase catalytic domain-like
  • F: RVT_1
UID: 001186619
Type: Automatic domain
Parent: e1ztwA1
Range: I:2-242
Ligands: MG ZP4
PDB: 3klf
PDB Description: Reverse transcriptase/ribonuclease H
UniProt: P03366
Hsap BLAST neighbor: P63135
Species:

Structure of domain e3klfI8

Domains in the same chain:

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e3klfI8 I:2-242 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3klfI7 I:243-316 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3klfI5 I:317-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase
e3klfI6 I:429-554 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like

Domains in the same PDB:

e3klfA7 A:2-242 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3klfA6 A:243-316 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3klfA5 A:317-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase
e3klfA3 A:429-554 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3klfB9 B:3-230 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3klfB7 B:231-304 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3klfB8 B:305-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase
e3klfE7 E:2-242 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3klfE6 E:243-316 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3klfE5 E:317-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase
e3klfE3 E:429-554 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3klfF9 F:3-230 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3klfF7 F:231-304 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3klfF8 F:305-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase
e3klfI8 I:2-242 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3klfI7 I:243-316 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3klfI5 I:317-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase
e3klfI6 I:429-554 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3klfJ6 J:3-230 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3klfJ4 J:231-304 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3klfJ5 J:305-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase
e3klfM8 M:2-242 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3klfM7 M:243-316 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3klfM5 M:317-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase
e3klfM6 M:429-554 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e3klfN6 N:3-230 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e3klfN4 N:231-304 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e3klfN5 N:305-428 Ribonuclease H-like RNaseH-like domain in reverse transcriptase RNaseH-like domain in reverse transcriptase

Structural contacts of domain e3klfI8 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3klfJ6 I:X,Y,Z->J:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3klfA6 I:x,y,z->A:-X,Y-1/2,-Z+1 helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e3klfA5 I:x,y,z->A:-X,Y-1/2,-Z+1 RNaseH-like domain in reverse transcriptase Interaction Interface Pymol