Domain ID e3klsB5

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  • A: alpha superhelices
  • X: Repetitive alpha hairpins
  • H: alpha/alpha toroid
  • T: alpha/alpha toroid
  • F: TED_complement
UID: 001813160
Type: Automatic domain
Parent: e4a5wA9
Range: B:986-1308
PDB: 3kls
PDB Description: Complement C5
UniProt: P01031
Hsap BLAST neighbor: P01031
Species: Homo sapiens

Structure of domain e3klsB5

Domains in the same chain:

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e3klsB18 B:22-121 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3klsB17 B:122-222 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3klsB13 B:223-348 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3klsB15 B:349-459 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3klsB16 B:460-565,B:612-673 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3klsB21 B:566-611,B:766-821 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3klsB19 B:679-765 Anaphylotoxins (complement system) Anaphylotoxins (complement system) Anaphylotoxins (complement system)
e3klsB14 B:822-932 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3klsB20 B:933-985,B:1309-1369 jelly-roll Spermadhesin, CUB domain Spermadhesin, CUB domain
e3klsB5 B:986-1308 Repetitive alpha hairpins alpha/alpha toroid alpha/alpha toroid
e3klsB12 B:1370-1532 Immunoglobulin-like beta-sandwich Immunoglobulin-related Common fold of diphtheria toxin/transcription factors/cytochrome f

Domains in the same PDB:

e3klsA10 A:22-121 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3klsA9 A:122-222 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3klsA5 A:223-348 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3klsA7 A:349-459 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3klsA8 A:460-565,A:612-673 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3klsA12 A:566-611,A:766-821 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3klsA1 A:679-765 Anaphylotoxins (complement system) Anaphylotoxins (complement system) Anaphylotoxins (complement system)
e3klsA6 A:822-932 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3klsA11 A:933-985,A:1309-1369 jelly-roll Spermadhesin, CUB domain Spermadhesin, CUB domain
e3klsA2 A:986-1308 Repetitive alpha hairpins alpha/alpha toroid alpha/alpha toroid
e3klsA4 A:1370-1515 Immunoglobulin-like beta-sandwich Immunoglobulin-related Common fold of diphtheria toxin/transcription factors/cytochrome f
e3klsA3 A:1516-1676 OB-fold TIMP-like TIMP-like
e3klsB18 B:22-121 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3klsB17 B:122-222 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3klsB13 B:223-348 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3klsB15 B:349-459 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3klsB16 B:460-565,B:612-673 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3klsB21 B:566-611,B:766-821 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3klsB19 B:679-765 Anaphylotoxins (complement system) Anaphylotoxins (complement system) Anaphylotoxins (complement system)
e3klsB14 B:822-932 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e3klsB20 B:933-985,B:1309-1369 jelly-roll Spermadhesin, CUB domain Spermadhesin, CUB domain
e3klsB5 B:986-1308 Repetitive alpha hairpins alpha/alpha toroid alpha/alpha toroid
e3klsB12 B:1370-1532 Immunoglobulin-like beta-sandwich Immunoglobulin-related Common fold of diphtheria toxin/transcription factors/cytochrome f
e3klsX1 X:40-126 OB-fold Bacterial enterotoxins Bacterial enterotoxins
e3klsX2 X:127-230 beta-Grasp Ubiquitin-related Ubiquitin-like
e3klsY1 Y:40-126 OB-fold Bacterial enterotoxins Bacterial enterotoxins
e3klsY2 Y:127-230 beta-Grasp Ubiquitin-related Ubiquitin-like

Structural contacts of domain e3klsB5 of H-group "alpha/alpha toroid":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3klsA5 B:x,y,z->A:-Y+1,X-Y+1,Z+1/3 Immunoglobulin-related Interaction Interface Pymol