Domain ID e3ko5D1

Download files:
  • A: a/b three-layered sandwiches
  • X: DTD-like
  • H: DTD-like (Pfam 02580)
  • T: DTD-like (Pfam 02580)
  • F: Tyr_Deacylase
UID: 000378468
Type: Automatic domain
Parent: e1jkeA1
Range: D:1-161
Ligands: ADP
PDB: 3ko5
PDB Description: D-tyrosyl-tRNA(Tyr) deacylase
UniProt: Q8IIS0
Hsap BLAST neighbor: Q8TEA8
Species:

Structure of domain e3ko5D1

Structural contacts of domain e3ko5D1 of H-group "DTD-like (Pfam 02580)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3ko5C1 D:x,y,z->C:X,Y,Z DTD-like (Pfam 02580) Interaction Interface Pymol
e3ko5B1 D:x,y,z->B:X-1,Y,Z DTD-like (Pfam 02580) Interaction Interface Pymol
e3ko5E1 D:x,y,z->E:X-1,Y,Z+1 DTD-like (Pfam 02580) Interaction Interface Pymol
e3ko5E1 D:x,y,z->E:X-1,Y-1,Z+1 DTD-like (Pfam 02580) Interaction Interface Pymol
e3ko5E1 D:X,Y,Z-1->E:x,y,z DTD-like (Pfam 02580) Interaction Interface Pymol
e3ko5A1 D:x,y,z->A:X,Y,Z DTD-like (Pfam 02580) Interaction Interface Pymol
e3ko5F1 D:x,y,z->F:X-1,Y,Z+1 DTD-like (Pfam 02580) Interaction Interface Pymol
e3ko5C1 D:X,Y-1,Z->C:x,y,z DTD-like (Pfam 02580) Interaction Interface Pymol
e3ko5B1 D:x,y,z->B:X,Y,Z DTD-like (Pfam 02580) Interaction Interface Pymol