| UID: | 000378468 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1jkeA1 |
| Range: | D:1-161 |
| Ligands: | ADP |
| PDB: | 3ko5 |
| PDB Description: | D-tyrosyl-tRNA(Tyr) deacylase |
| UniProt: | Q8IIS0 |
| Hsap BLAST neighbor: | Q8TEA8 |
| Species: |
Structure of domain e3ko5D1
Domains in the same chain:
| e3ko5D1 | D:1-161 | DTD-like | DTD-like (Pfam 02580) | DTD-like (Pfam 02580) |
Domains in the same PDB:
Structural contacts of domain e3ko5D1 of H-group "DTD-like (Pfam 02580)":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e3ko5C1 | D:x,y,z->C:X,Y,Z | DTD-like (Pfam 02580) | Interaction Interface Pymol |
| e3ko5B1 | D:x,y,z->B:X-1,Y,Z | DTD-like (Pfam 02580) | Interaction Interface Pymol |
| e3ko5E1 | D:x,y,z->E:X-1,Y,Z+1 | DTD-like (Pfam 02580) | Interaction Interface Pymol |
| e3ko5E1 | D:x,y,z->E:X-1,Y-1,Z+1 | DTD-like (Pfam 02580) | Interaction Interface Pymol |
| e3ko5E1 | D:X,Y,Z-1->E:x,y,z | DTD-like (Pfam 02580) | Interaction Interface Pymol |
| e3ko5A1 | D:x,y,z->A:X,Y,Z | DTD-like (Pfam 02580) | Interaction Interface Pymol |
| e3ko5F1 | D:x,y,z->F:X-1,Y,Z+1 | DTD-like (Pfam 02580) | Interaction Interface Pymol |
| e3ko5C1 | D:X,Y-1,Z->C:x,y,z | DTD-like (Pfam 02580) | Interaction Interface Pymol |
| e3ko5B1 | D:x,y,z->B:X,Y,Z | DTD-like (Pfam 02580) | Interaction Interface Pymol |
