Domain ID e3koaA2

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: Adenylyl and guanylyl cyclase catalytic domain-like
  • F: RdRP_1
UID: 000394767
Type: Automatic domain
Parent: e1ra6A2
Range: A:1-377
Ligands: DPO MG
PDB: 3koa
PDB Description: 3D polymerase
UniProt: Q9QCE3
Species:

Structure of domain e3koaA2

Structural contacts of domain e3koaA2 of H-group "Adenylyl and guanylyl cyclase catalytic domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3koaA1 A:x,y,z->A:-X+1,-X+Y,-Z+2/3 helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e3koaA2 A:x,y,z->A:Y,X,-Z+1 Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3koaA2 A:Y,X,-Z+1->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3koaA2 A:x,y,z->A:-X,-X+Y,-Z+2/3 Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3koaA2 A:-X,-X+Y,-Z+2/3->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3koaA2 A:x,y,z->A:X-Y,-Y,-Z+1/3 Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3koaA2 A:X-Y,-Y,-Z+1/3->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3koaA2 A:x,y,z->A:Y,X,-Z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3koaA2 A:Y,X,-Z->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3koaA1 A:x,y,z->A:-Y+1,X-Y,Z-1/3 helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e3koaA2 A:x,y,z->A:-Y,X-Y,Z-1/3 Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e3koaA2 A:-Y,X-Y,Z-1/3->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol