Domain ID e3kobA1

Download files:
  • A: a/b three-layered sandwiches
  • X: DTD-like
  • H: DTD-like (Pfam 02580)
  • T: DTD-like (Pfam 02580)
  • F: Tyr_Deacylase
UID: 000378958
Type: Automatic domain
Parent: e1jkeA1
Range: A:1-160
Ligands: DGL
PDB: 3kob
PDB Description: D-tyrosyl-tRNA(Tyr) deacylase
UniProt: Q8IIS0
Hsap BLAST neighbor: Q8TEA8
Species:

Structure of domain e3kobA1

Structural contacts of domain e3kobA1 of H-group "DTD-like (Pfam 02580)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3kobB1 A:X,Y,Z->B:x,y,z DTD-like (Pfam 02580) Interaction Interface Pymol
e3kobF1 A:X,Y,Z->F:x,y,z DTD-like (Pfam 02580) Interaction Interface Pymol
e3kobF1 A:x,y,z->F:X,Y-1,Z DTD-like (Pfam 02580) Interaction Interface Pymol
e3kobD1 A:X,Y,Z->D:x,y,z DTD-like (Pfam 02580) Interaction Interface Pymol
e3kobE1 A:x,y,z->E:X,Y-1,Z DTD-like (Pfam 02580) Interaction Interface Pymol
e3kobC1 A:X-1,Y-1,Z->C:x,y,z DTD-like (Pfam 02580) Interaction Interface Pymol
e3kobD1 A:X-1,Y-1,Z->D:x,y,z DTD-like (Pfam 02580) Interaction Interface Pymol
e3kobA1 A:x,y,z->A:X-1,Y,Z DTD-like (Pfam 02580) Interaction Interface Pymol
e3kobA1 A:X-1,Y,Z->A:x,y,z DTD-like (Pfam 02580) Interaction Interface Pymol