Domain ID e3kozD5

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  • A: a+b two layers
  • X: Dodecin subunit-like
  • H: D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain
  • T: D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain
  • F: OAM_dimer
UID: 001240931
Type: Automatic domain
Parent: e1xrsB1
Range: D:509-587
PDB: 3koz
PDB Description: D-ornithine aminomutase E component
UniProt: E3PY95
Species: [Clostridium] sticklandii

Structure of domain e3kozD5

Domains in the same chain:

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e3kozD3 D:5-506 TIM beta/alpha-barrel TIM barrels TIM barrels
e3kozD5 D:509-587 Dodecin subunit-like D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain
e3kozD1 D:591-740 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like

Domains in the same PDB:

e3kozA3 A:5-506 TIM beta/alpha-barrel TIM barrels TIM barrels
e3kozA5 A:509-587 Dodecin subunit-like D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain
e3kozA1 A:591-740 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like
e3kozB3 B:5-506 TIM beta/alpha-barrel TIM barrels TIM barrels
e3kozB5 B:509-587 Dodecin subunit-like D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain
e3kozB1 B:591-740 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like
e3kozC3 C:5-506 TIM beta/alpha-barrel TIM barrels TIM barrels
e3kozC5 C:509-587 Dodecin subunit-like D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain
e3kozC1 C:591-740 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like
e3kozD3 D:5-506 TIM beta/alpha-barrel TIM barrels TIM barrels
e3kozD5 D:509-587 Dodecin subunit-like D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain
e3kozD1 D:591-740 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like
e3kozE1 E:5-114 D-ornithine aminomutase S component-related D-ornithine aminomutase S component-related D-ornithine aminomutase S component-related
e3kozF1 F:5-114 D-ornithine aminomutase S component-related D-ornithine aminomutase S component-related D-ornithine aminomutase S component-related
e3kozG1 G:5-114 D-ornithine aminomutase S component-related D-ornithine aminomutase S component-related D-ornithine aminomutase S component-related
e3kozH1 H:5-114 D-ornithine aminomutase S component-related D-ornithine aminomutase S component-related D-ornithine aminomutase S component-related

Structural contacts of domain e3kozD5 of H-group "D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3kozB5 D:x,y,z->B:X,Y,Z D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain Interaction Interface Pymol
e3kozB3 D:x,y,z->B:X,Y,Z TIM barrels Interaction Interface Pymol
e3kozC1 D:x,y,z->C:-X,Y-1/2,-Z Class I glutamine amidotransferase-like Interaction Interface Pymol