Domain ID e3ktmD1

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  • A: a+b two layers
  • X: Dodecin subunit-like
  • H: Amyloid beta a4 protein copper binding domain (domain 2)
  • T: Amyloid beta a4 protein copper binding domain (domain 2)
  • F: APP_Cu_bd
UID: 000384790
Type: Automatic domain
Parent: e2fklA1
Range: D:124-200
Ligands: BU4 SO4
PDB: 3ktm
PDB Description: AMYLOID BETA A4 PROTEIN
UniProt: P05067
Hsap BLAST neighbor: P05067
Species: Homo sapiens

Structure of domain e3ktmD1

Domains in the same chain:

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e3ktmD2 D:28-123 SRCR-like A heparin-binding domain A heparin-binding domain
e3ktmD1 D:124-200 Dodecin subunit-like Amyloid beta a4 protein copper binding domain (domain 2) Amyloid beta a4 protein copper binding domain (domain 2)

Domains in the same PDB:

e3ktmA1 A:28-123 SRCR-like A heparin-binding domain A heparin-binding domain
e3ktmA2 A:124-202 Dodecin subunit-like Amyloid beta a4 protein copper binding domain (domain 2) Amyloid beta a4 protein copper binding domain (domain 2)
e3ktmB2 B:26-123 SRCR-like A heparin-binding domain A heparin-binding domain
e3ktmB1 B:124-198 Dodecin subunit-like Amyloid beta a4 protein copper binding domain (domain 2) Amyloid beta a4 protein copper binding domain (domain 2)
e3ktmC2 C:26-123 SRCR-like A heparin-binding domain A heparin-binding domain
e3ktmC1 C:124-199 Dodecin subunit-like Amyloid beta a4 protein copper binding domain (domain 2) Amyloid beta a4 protein copper binding domain (domain 2)
e3ktmD2 D:28-123 SRCR-like A heparin-binding domain A heparin-binding domain
e3ktmD1 D:124-200 Dodecin subunit-like Amyloid beta a4 protein copper binding domain (domain 2) Amyloid beta a4 protein copper binding domain (domain 2)
e3ktmE2 E:26-123 SRCR-like A heparin-binding domain A heparin-binding domain
e3ktmE1 E:124-202 Dodecin subunit-like Amyloid beta a4 protein copper binding domain (domain 2) Amyloid beta a4 protein copper binding domain (domain 2)
e3ktmF2 F:28-123 SRCR-like A heparin-binding domain A heparin-binding domain
e3ktmF1 F:124-202 Dodecin subunit-like Amyloid beta a4 protein copper binding domain (domain 2) Amyloid beta a4 protein copper binding domain (domain 2)
e3ktmG2 G:28-123 SRCR-like A heparin-binding domain A heparin-binding domain
e3ktmG1 G:124-201 Dodecin subunit-like Amyloid beta a4 protein copper binding domain (domain 2) Amyloid beta a4 protein copper binding domain (domain 2)
e3ktmH2 H:26-123 SRCR-like A heparin-binding domain A heparin-binding domain
e3ktmH1 H:124-200 Dodecin subunit-like Amyloid beta a4 protein copper binding domain (domain 2) Amyloid beta a4 protein copper binding domain (domain 2)

Structural contacts of domain e3ktmD1 of H-group "Amyloid beta a4 protein copper binding domain (domain 2)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3ktmB2 D:x,y,z->B:-Y,X-Y,Z A heparin-binding domain Interaction Interface Pymol
e3ktmB1 D:x,y,z->B:-Y,X-Y,Z Amyloid beta a4 protein copper binding domain (domain 2) Interaction Interface Pymol
e3ktmH1 D:x,y,z->H:-X+Y-1/3,-X+1/3,Z+1/3 Amyloid beta a4 protein copper binding domain (domain 2) Interaction Interface Pymol
e3ktmA2 D:x,y,z->A:-Y,X-Y,Z Amyloid beta a4 protein copper binding domain (domain 2) Interaction Interface Pymol
e3ktmF1 D:X,Y,Z->F:x,y,z Amyloid beta a4 protein copper binding domain (domain 2) Interaction Interface Pymol